PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP026544.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Trihelix
Protein Properties Length: 351aa    MW: 38707.9 Da    PI: 9.7665
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP026544.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix46.87.8e-151690171
     trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr 71
                 +Wt++e +aL++++++++ +l+r++lk ++W++v++ +          ++++qC++k+e+l++r++ +ke+ + +
  PCP026544.1 16 CWTHDESHALVALYKDRWLALGRSNLKSADWDSVASSVndrcPLVSPPKTAIQCRHKMEKLRRRFRTEKERVSIH 90
                 8*************************************6433333448999******************997765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MSSLAEPKSR KFPTPCWTHD ESHALVALYK DRWLALGRSN LKSADWDSVA SSVNDRCPLV  60
SPPKTAIQCR HKMEKLRRRF RTEKERVSIH PGTAPFFSAW DLFQPMIDLE CDSPLVFGSN  120
PDPEIRTGVQ YGGGFRVRNY ESYRYLADSD QNLSDPDETT PKGAGFGGGF RVKDPVRGPN  180
SGVSAGYDRY GSRGSDGGSG FPVKSLGDRN LGPSDFRIKG YGKSNEKFNP KLISKRSGSN  240
GVGSGCGFNQ KFGGGLHSNG VGLEDLGGSS SGKGADDPIE AMASSIEFLG EVFVKMEKRK  300
MEMAGEMAKM RMKMEMKQNQ LIMESQKQMV DACVKALWET KKKKKKMKDE P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.17e-29Trihelix family protein