PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP026525.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family B3
Protein Properties Length: 415aa    MW: 47452 Da    PI: 9.5873
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP026525.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.43.9e-1616100598
                  -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  l+++d +++   ++p +f++++ ++   s+t +l+ ++gr+W v +  +k ++++++ +GW+eF +   +++g f++F+++g s+f  +v++f+
  PCP026525.1  16 LMSHDRTSK---RIPESFVQKFRNE--LSTTAKLTVPDGRVWHVGV--KKVDNKFWFHGGWQEFIEHYSIRVGYFLTFRYEGCSSF--TVHIFN 100
                  444444444...6******999744..999****************..********************************987888..888885 PP
2B361.81.2e-19306396498
                  E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3   4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  vl ps+  + ++++lp  fae++ +g++     ++l++ +gr+W+v++ yr+++    l++GW eF  +n+L egD++vF++ + ++  l+v+vfr
  PCP026525.1 306 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQSADGRQWSVRCLYRGGR--AKLSQGWYEFTMDNNLGEGDVCVFEFLKMKDIVLKVTVFR 396
                  78899******************877743...5***************665555..66***********************988899989999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MMVAPLLRLI QLHSKLMSHD RTSKRIPESF VQKFRNELST TAKLTVPDGR VWHVGVKKVD  60
NKFWFHGGWQ EFIEHYSIRV GYFLTFRYEG CSSFTVHIFN LKTAEINYQP TALSSTGGSV  120
YRYQVFEEME DDDSVEILGS SPTSIVTDSL RDKRFGDSAN QLMPGKNCTP SLQNLFNGSK  180
PKNCMSRSDA GNLHLSKGDD LQAGNESTRD NGLQFNVTEL KKTVDEVKLR SPGEDTRSIK  240
KTMRKKRKVN PDVQESSSKQ EKEVEIRFRF YESASARKRT VTAEERERAI NAAKTFEPDN  300
PFCRVVLRPS YLYRGCIMYL PSCFAEKNLN GVSGFIKLQS ADGRQWSVRC LYRGGRAKLS  360
QGWYEFTMDN NLGEGDVCVF EFLKMKDIVL KVTVFRVLED AGFVNQPQKR HLTPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-120B3 family protein