PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026480.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 1697aa MW: 189714 Da PI: 6.8758

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026480.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	133.5	1.4e-41	979	1136	6	128
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....................................kvkaeek..ewyfFsk 63 FhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp + + e + PCP026480.1 979 AFHPTDEELVAYYLKRKINGRKIEL-EVIAEVDLYKCEPWDLPGrmgrnptpyppepswggpvvgdefqarishdtcwvsI-YDAGElgEAEMSLP 1072 4**********************.99***********4589****************999988888776642.2222235667899 PP NAM 64 rdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 rd+ky++g+r+nratk+gyWkatgkd++v s ++++vg+kktLv+y+grap+g +tdWvmheyrl PCP026480.1 1073 RDRKYPNGSRTNRATKAGYWKATGKDRKVNS-QTRAVGMKKTLVYYRGRAPHGIRTDWVMHEYRL 1136 *****************************.9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1697 aa Download sequence
MDEEGSPSSA LSGFPRTLLK CIITIVFSLV TKDEKFLIWC SRKEERQLKL SSVTKVIPGQ 60 WTVSLQGKLE PERKGQSFSI VYAHSECSLD LMCKDEIQCD LWILGLRALI SLHRHPRPLN 120 NLGSFRQVQS CLNSPAGLFR RRQTLGIVDD GNEFSQVRSV CRSPTLTPSE RCISDGISFS 180 SDSFFSSESV LSNMQNVMDI SVPDSPYIGS DYLKRRRIYF DADCEPPRFV SYAYGTSRIE 240 KDNILKDVMI WGESIGGNVS GLQADSLLPK LLETTMTMDV QNISLGGKHA AVVTKQGEVF 300 CWGHANGGRL GHKINMDVSN PKPVDSLNGI QVKSVSCGEY QTCALTHCGE LYTWGDTSCG 360 ASLEAEEKSF SQWLPHKLSV PLNKINVSYV ACGEWHTAMV STSGNLFTYG DGTFGVLGHG 420 NLDSVINRKQ LVDHDFVQVC CGRMLTVGLT NKGAVYTIGS SVHGQLGNAQ AKDKSITLVE 480 GKLKEESVRE LASGSYHIAV LTARGNVYTW GKGTNGQLGL GDINDRSTPT FVEALRDRQV 540 ESVVCGSNST AAICFHKSIS VSDQSACYRC NLPFGFTRKK HNCYNCGLLF CHSCSSKRAM 600 DSSLAPKKGK AFRVCDSCFS NLQKLTHSCR SFKQENHSSM KLLTEEKSVP DGKEEKAGET 660 PKYGHLLSIK QACYKKRQSR VRTTTMKNQE GNQQHLEPAS SSLSEEPRWG QVSCPDLFKP 720 YYRENYTALN SLSKDHLSSV VPVHSESTMS GATNAEKCIS MSDEMLIEEI QRLTVEAHNL 780 ERKCKIGSQK IHECEQKTEE TWSLARDEAA TCKAAQEVIK ALALRLKTKT ISEKASAGKQ 840 PNNGIDTKFP QLTPLNTNTP LPEVDSVSDL PAVLSDMPKS EPHGRETKSA KLEWVEQFEP 900 GVHLTLVVLP NGQRGLKRVN FSQKKFADKD VERWWEGAIF QYVVGPVNLS AKPWTLVIVG 960 IFFWEPGLLY ASKGFSVRAF HPTDEELVAY YLKRKINGRK IELEVIAEVD LYKCEPWDLP 1020 GRMGRNPTPY PPEPSWGGPV VGDEFQARIS HDTCWVSIYD AGELGEAEMS LPRDRKYPNG 1080 SRTNRATKAG YWKATGKDRK VNSQTRAVGM KKTLVYYRGR APHGIRTDWV MHEYRLDERE 1140 CETAQGLQVQ DAYALCRIFK KTATGPKIGE HYGSTSTTNY QLTSDHSSSV NELYSDGGRC 1200 EDFESSSYPM QMHNACSSSP NFVHKNSLDD MGRKRDGKWT QFLSKEAFNC SSSFSPFPNH 1260 ENVSHPPSKV DIALECARLQ HRLSLPPLEV EDFPQVGLTD FKTMQYSNPA LDTTSTETDA 1320 LQEILSVAHV SQEMVNQSSN LVDQTWGGNY APPANDFSFM VDRDAHYNQI TDHLNSMRYV 1380 DKKTWGNSYT RSIEIGDLKD DFRMENTAEN LRWIGMSDKD LEKSFTEEHK IIPIENISSF 1440 RGEEEEQHYE AQGGPGHRSG IIKELNDNEA NDDDFSLSFI NEDPNENFLH DGNMDDYSTS 1500 PSFEVIEEVQ VNHGMFVSTR QVAETFFHQL VPSQTVKVHL NPVFGQNLLV ERVVTQTKSE 1560 GRGSFFERFK ELVMEKFDGI AKSTKPWRKI ASTLVCAVTL ILMHMIIYLG QHMEDEKLMD 1620 AFTTTTTATI VEEKGNSNIS KKEGLGLIKW SNKKEKVCLV NIRGGNSCSV FLKKMGIFLT 1680 VSLALGTMWA NHNIIPS

Sequence ? help Back to Top

Protein Sequence Length: 1697 aa Download sequence

MDEEGSPSSA LSGFPRTLLK CIITIVFSLV TKDEKFLIWC SRKEERQLKL SSVTKVIPGQ  60
WTVSLQGKLE PERKGQSFSI VYAHSECSLD LMCKDEIQCD LWILGLRALI SLHRHPRPLN  120
NLGSFRQVQS CLNSPAGLFR RRQTLGIVDD GNEFSQVRSV CRSPTLTPSE RCISDGISFS  180
SDSFFSSESV LSNMQNVMDI SVPDSPYIGS DYLKRRRIYF DADCEPPRFV SYAYGTSRIE  240
KDNILKDVMI WGESIGGNVS GLQADSLLPK LLETTMTMDV QNISLGGKHA AVVTKQGEVF  300
CWGHANGGRL GHKINMDVSN PKPVDSLNGI QVKSVSCGEY QTCALTHCGE LYTWGDTSCG  360
ASLEAEEKSF SQWLPHKLSV PLNKINVSYV ACGEWHTAMV STSGNLFTYG DGTFGVLGHG  420
NLDSVINRKQ LVDHDFVQVC CGRMLTVGLT NKGAVYTIGS SVHGQLGNAQ AKDKSITLVE  480
GKLKEESVRE LASGSYHIAV LTARGNVYTW GKGTNGQLGL GDINDRSTPT FVEALRDRQV  540
ESVVCGSNST AAICFHKSIS VSDQSACYRC NLPFGFTRKK HNCYNCGLLF CHSCSSKRAM  600
DSSLAPKKGK AFRVCDSCFS NLQKLTHSCR SFKQENHSSM KLLTEEKSVP DGKEEKAGET  660
PKYGHLLSIK QACYKKRQSR VRTTTMKNQE GNQQHLEPAS SSLSEEPRWG QVSCPDLFKP  720
YYRENYTALN SLSKDHLSSV VPVHSESTMS GATNAEKCIS MSDEMLIEEI QRLTVEAHNL  780
ERKCKIGSQK IHECEQKTEE TWSLARDEAA TCKAAQEVIK ALALRLKTKT ISEKASAGKQ  840
PNNGIDTKFP QLTPLNTNTP LPEVDSVSDL PAVLSDMPKS EPHGRETKSA KLEWVEQFEP  900
GVHLTLVVLP NGQRGLKRVN FSQKKFADKD VERWWEGAIF QYVVGPVNLS AKPWTLVIVG  960
IFFWEPGLLY ASKGFSVRAF HPTDEELVAY YLKRKINGRK IELEVIAEVD LYKCEPWDLP  1020
GRMGRNPTPY PPEPSWGGPV VGDEFQARIS HDTCWVSIYD AGELGEAEMS LPRDRKYPNG  1080
SRTNRATKAG YWKATGKDRK VNSQTRAVGM KKTLVYYRGR APHGIRTDWV MHEYRLDERE  1140
CETAQGLQVQ DAYALCRIFK KTATGPKIGE HYGSTSTTNY QLTSDHSSSV NELYSDGGRC  1200
EDFESSSYPM QMHNACSSSP NFVHKNSLDD MGRKRDGKWT QFLSKEAFNC SSSFSPFPNH  1260
ENVSHPPSKV DIALECARLQ HRLSLPPLEV EDFPQVGLTD FKTMQYSNPA LDTTSTETDA  1320
LQEILSVAHV SQEMVNQSSN LVDQTWGGNY APPANDFSFM VDRDAHYNQI TDHLNSMRYV  1380
DKKTWGNSYT RSIEIGDLKD DFRMENTAEN LRWIGMSDKD LEKSFTEEHK IIPIENISSF  1440
RGEEEEQHYE AQGGPGHRSG IIKELNDNEA NDDDFSLSFI NEDPNENFLH DGNMDDYSTS  1500
PSFEVIEEVQ VNHGMFVSTR QVAETFFHQL VPSQTVKVHL NPVFGQNLLV ERVVTQTKSE  1560
GRGSFFERFK ELVMEKFDGI AKSTKPWRKI ASTLVCAVTL ILMHMIIYLG QHMEDEKLMD  1620
AFTTTTTATI VEEKGNSNIS KKEGLGLIKW SNKKEKVCLV NIRGGNSCSV FLKKMGIFLT  1680
VSLALGTMWA NHNIIPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	214	218	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-127	NAC family protein