PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026459.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 370aa MW: 41387.8 Da PI: 7.0003

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026459.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.5	7.4e-55	5	131	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtdeel+++yL++kv++ +++ +++++vd++k+ePwdLp k++ +ekewyfF rd+ky+tg r+nrat++gyWk+tgkdke+++ +g PCP026459.1 5 LPPGFRFHPTDEELITHYLCPKVSDVSFTS-KAVADVDLNKCEPWDLPGKASMGEKEWYFFNLRDRKYPTGLRTNRATEAGYWKTTGKDKEIHR-TGV 100 79***********************999.88***********988999************************************9.99 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 lvg+kktLvfykgrap+gek++Wvmheyrle PCP026459.1 101 LVGMKKTLVFYKGRAPRGEKSNWVMHEYRLE 131 *****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MQESLPPGFR FHPTDEELIT HYLCPKVSDV SFTSKAVADV DLNKCEPWDL PGKASMGEKE 60 WYFFNLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIHRTGV LVGMKKTLVF YKGRAPRGEK 120 SNWVMHEYRL ENKHPFNSSK EEWVVCRVFQ KSISALKKPQ QATTSSHQQP STESPCDDTN 180 SIVNEFGDIE LPNLNSNINA NSSSGFSNNI SSPPSYYSNI IDHSKNNIND VTNMSLNMNW 240 AATAAREAAA NAVSWPSSLL SPSNLSVNSL LLRALHLSSS TNNNGSNYQP RDTNHGQATA 300 GTSTLDYSSY NNMQQQGMMP SMSHHIGSST TMDHINSNFQ ASSSSIKDQM MESMPPQQHS 360 EQPFNLDSIW

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MQESLPPGFR FHPTDEELIT HYLCPKVSDV SFTSKAVADV DLNKCEPWDL PGKASMGEKE  60
WYFFNLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIHRTGV LVGMKKTLVF YKGRAPRGEK  120
SNWVMHEYRL ENKHPFNSSK EEWVVCRVFQ KSISALKKPQ QATTSSHQQP STESPCDDTN  180
SIVNEFGDIE LPNLNSNINA NSSSGFSNNI SSPPSYYSNI IDHSKNNIND VTNMSLNMNW  240
AATAAREAAA NAVSWPSSLL SPSNLSVNSL LLRALHLSSS TNNNGSNYQP RDTNHGQATA  300
GTSTLDYSSY NNMQQQGMMP SMSHHIGSST TMDHINSNFQ ASSSSIKDQM MESMPPQQHS  360
EQPFNLDSIW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18400.1	1e-107	NAC family protein