PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP025952.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 335aa MW: 37174.4 Da PI: 4.91

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP025952.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.3	2.6e-08	284	317	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp+++++ LA+ ++L+++q+ +WF N+R ++ PCP025952.1 284 WPYPTEADKISLAQVTRLDQKQINNWFINQRKRH 317 58*****************************885 PP
2	ELK	31.2	5e-11	237	257	1	21
ELK 1 ELKhqLlrKYsgyLgsLkqEF 21 ELK+ Llr Ysgy+++Lk EF PCP025952.1 237 ELKDKLLRRYSGYISTLKREF 257 9*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MMEDLYGLAG SSSTPSAGFS SDLYYSSSMA DMPFSANTTV PDHQLDYYCT YRSRSASFEP 60 LAAALGEQRI PGTMRPDQMF SGSSSGVSDA ASVVAAGIQR RGGGEGGWGE EVSCQMNEMI 120 ASHPLYPKLL QAYIDCQKVG APPEIASVLD EIRPQSDHLI SRRPTASTCM ATADPDLDLF 180 MAAGRPSGNE SSLELSVEDN TWSACHMDDA AGSSDEGDWS GGEIEAQDSP RTNEDHELKD 240 KLLRRYSGYI STLKREFTKK KKNGKLPREA RKILFDWWNL HDKWPYPTEA DKISLAQVTR 300 LDQKQINNWF INQRKRHWKP SENMQYAVMD SLCGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	4e-67	TALE family protein