PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP025842.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 362aa    MW: 39293.4 Da    PI: 8.7979
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP025842.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof120.56e-3875135262
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                  +e+alkcprC+stntkfCy+nny+lsqPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+
  PCP025842.1  75 PETALKCPRCESTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSK 135
                  67899*****************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    
MVFSSVPVYL DPPNWQQQQT NHHQQGGGCD QNNPQLPQQP SSEPRCTSRD GSGSLGSIKP  60
GSMSDRARLA KIPQPETALK CPRCESTNTK FCYFNNYNLS QPRHFCKTCR RYWTRGGALR  120
SVPVGGGCRR NKRSKGGNSS RSKSPGAAGN SSSSTVNSSN SCSTSDNIIG RLTHPPPPPP  180
PHQLPFLPSL HHLTDYGSGD MIGLNNFGGI NQPGDVEFQH DQYGSDRLSA RPNILGMNNM  240
GISEHWRSSL LQQQFPNFLA NLEPPPSTTH GMYQFDGGDH QNVGQLPISK PLDHSAGNGV  300
TTTQMVNVKM EHSHQALNLS RNFLGSLGND HQYWGISTAG TGGNAWTDLS GFTSSSSTTH  360
LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02460.15e-41Dof family protein