PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP025348.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family SRS
Protein Properties Length: 450aa    MW: 50746.9 Da    PI: 7.7625
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP025348.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70226.41.9e-085390542
       DUF702  5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkst 42
                 + +C++CGn a+  C +e C+ CC      C+ hv  t
  PCP025348.1 53 KPKCKQCGNVARSRCPYESCKSCCSKAQNPCHIHVLKT 90
                 569********************************776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
MAAAPSPSPA LSNNSSGDTR PTTTATAAAP PVAPFHPVHR TDTPPKTLRG LNKPKCKQCG  60
NVARSRCPYE SCKSCCSKAQ NPCHIHVLKT NTTFPDKAPT SNSPLFDHQS TDASPSGNSH  120
RVASFRQLSI NFAQFNNLHI PLRSKKPLTR KDAVAINEWR FSKLREYKDG NIEVENEAFD  180
RYMQNVSLLE QVFSVESIAE ESMRDGSSIS NQNTTTNTTE DNTEAMVSGL KLKLRSNPMR  240
TSNFRKRIQQ IVDEGLKKLQ KCEFDDGGKK SSVPNGLDKG PKKEETRWAG RTSALGDLID  300
KLNKARNKED LKACLDLKSQ LFSEHKLTGR TESEDADIMK KHTAKNDSEP GKEWNYRRFM  360
NKKIQKLKEL KVSFMRLAHE KEISNMILLK KVEELSNGVE ELRRLVKEKH TDEDAKEEEE  420
EEKKDVGDQV VEGGKDEEEG EEDEKEKEEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32730.14e-96SRS family protein