PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP025221.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 100aa    MW: 11165.5 Da    PI: 9.7735
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP025221.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.21.9e-081458345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+   + + +a + + ++   +W  +a+ +g g+t++++k ++ 
      PCP025221.1 14 SWTAKQNKAFEKALAVYDKDtadRWYNVAKAVG-GKTPEEVKRHYE 58
                     7********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MASSSMSSRG SDSSWTAKQN KAFEKALAVY DKDTADRWYN VAKAVGGKTP EEVKRHYELL  60
VQDVKHIESG QVAFPDYRTT GGMRNLKLHW SSITHSLSTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.15e-38MYB_related family protein