PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024724.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 315aa    MW: 34640 Da    PI: 8.785
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024724.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.21e-3940101263
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                  ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrn+PvGgg+rknk+sss
  PCP024724.1  40 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSS 101
                  7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MDTSQWPQGI VVNPIEEIVT NSCPKPAAAN NLERKARPQK EQALNCPRCN STNTKFCYYN  60
NYSLTQPRYF CKTCRRYWTE GGSLRNIPVG GGSRKNKRSS SLNNSPSTTS NNSSSSSASK  120
RLPDLIHQNP KINQAQDLNL TFPSTNQDFR NIISDHLLNH HHQQFPNNNI NNENTNKQQN  180
HISSSSPTST STTTTTSHLS ALELLTGFTS RGLNSFMPMP VSSDPNNNSN TIYNSPSGLI  240
NPMQDFKPTL NFSLDGLGSG YGSLQGHHVQ ESSGRLLFPF EDLKQAPSGG GINEQNKEHG  300
DSAGYWTGML GGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.14e-48Dof family protein