PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024649.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 355aa    MW: 39889.3 Da    PI: 10.1022
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024649.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.32.4e-31289346359
                  -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  PCP024649.1 289 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 346
                  99***********************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MEEVEEANKT AVESCHRVLS LLSQPQEQVQ YRNLMVETGK AVSRFKKVVS ILNTGLGHAR  60
VRKLKKLQIP FPERILLDNP ISIADHPSKT PHFLQSSFPE NPTQDLSLDV KSALCLGSPS  120
LELSANGKTP IHPAQQVPPA QYHLLQQQRQ HQQHQQQQQL QQRMLLQQHQ MKQQTEMMYR  180
RSNSGINLNF DSSSCTPTMS STRSFISSLS IDGSVANFDG NSFHLLGAPL SSDQNSQHKR  240
KCSARGDDGS VKCGGSSGRC HCSKKRKHRV KRSIKVPAIS NKLADIPPDD YSWRKYGQKP  300
IKGSPHPRGY YKCSSMRGCP ARKHVERCLE EPSMLIVTYE GEHNHPRIPS QSTTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-118WRKY family protein