PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP024490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NF-YB | ||||||||
Protein Properties | Length: 250aa MW: 27135.3 Da PI: 6.5145 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 153.1 | 5.1e-48 | 57 | 151 | 2 | 96 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 r qd+++Pianv+rim++vlP +aki+++aketvqecvse+i+f+t+ea++++qre+rkt++++d++wa+++lGfe+yv+pl+v+l++yre e+ PCP024490.1 57 RVQDQHMPIANVVRIMRRVLPPHAKITEAAKETVQECVSEYIAFITAEANQRSQREQRKTVSAEDIIWAMSKLGFENYVDPLNVFLHRYRESENS 151 679****************************************************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MERMGGGLPR RHANSPNAAN SNNSGDGHAV GNTSNPANAT GSTGNNTAQS THRPVVRVQD 60 QHMPIANVVR IMRRVLPPHA KITEAAKETV QECVSEYIAF ITAEANQRSQ REQRKTVSAE 120 DIIWAMSKLG FENYVDPLNV FLHRYRESEN SDRSQFMKRE HPLMDYGPAV PSGPAGPQVA 180 MMPPPLLPHF VPEFPLGFEQ RGPPMLDPSM IEIFLDGGSS TGAAEGGSSS SFGAQDQNWL 240 GGFDPSAQSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21970.1 | 1e-52 | NF-YB family protein |