PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024421.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

GeBP

Protein Properties

Length: 431aa MW: 46889.8 Da PI: 4.4091

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024421.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	116.8	1.2e-36	132	231	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk.spsd...didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 lfqrlw++eDei lLqG++d+++++g+ +++ d+ fy+++k +++++++k+qlveK+rrLKkK+++ v+k++sgke+sf+++hdq +fe+s+ki PCP024421.1 132 LFQRLWTDEDEIELLQGFLDYTTQRGSrGSHQgpnDTALFYDQIKCKLQLDFNKNQLVEKLRRLKKKYRNVVTKIESGKEVSFKSPHDQATFEISRKI 229 79**********************984444456************************************************************* PP DUF573 96 Wg 97 W PCP024421.1 230 WS 231 *6 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MAPDQDDAVL PEGDLSSSSQ DEEEDDDVVD EDEEEDDVDV DDDDDVINSA SPSTSSAGAT 60 DSLPVAIATA TPTVTVALPA RAPPTVPLTL ASAPTTVITN DAVLSSDPKR HPALSSQPEE 120 KKPAVLDDSR RLFQRLWTDE DEIELLQGFL DYTTQRGSRG SHQGPNDTAL FYDQIKCKLQ 180 LDFNKNQLVE KLRRLKKKYR NVVTKIESGK EVSFKSPHDQ ATFEISRKIW SNIGRIGAAD 240 ENALDDEDPS PNPNNPNFNS YEIKAEEAAG FAGDKKSTPR SRKRSRIQPR SDEKPPPPPL 300 RGGFIEPTPV IKDNNNGINS NNGGAGTNGS NCNVHGLIEE TVKSCLSPLF KELLSNAMGV 360 GPSRGFGGLA FNPIPLSFGG PLMNLNFGGG EVADDKWRKQ QILELEVYSK RLDLVQNQIK 420 VALDELRSNG G

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MAPDQDDAVL PEGDLSSSSQ DEEEDDDVVD EDEEEDDVDV DDDDDVINSA SPSTSSAGAT  60
DSLPVAIATA TPTVTVALPA RAPPTVPLTL ASAPTTVITN DAVLSSDPKR HPALSSQPEE  120
KKPAVLDDSR RLFQRLWTDE DEIELLQGFL DYTTQRGSRG SHQGPNDTAL FYDQIKCKLQ  180
LDFNKNQLVE KLRRLKKKYR NVVTKIESGK EVSFKSPHDQ ATFEISRKIW SNIGRIGAAD  240
ENALDDEDPS PNPNNPNFNS YEIKAEEAAG FAGDKKSTPR SRKRSRIQPR SDEKPPPPPL  300
RGGFIEPTPV IKDNNNGINS NNGGAGTNGS NCNVHGLIEE TVKSCLSPLF KELLSNAMGV  360
GPSRGFGGLA FNPIPLSFGG PLMNLNFGGG EVADDKWRKQ QILELEVYSK RLDLVQNQIK  420
VALDELRSNG G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	5e-79	GeBP family protein