PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP023848.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 264aa    MW: 28178.3 Da    PI: 6.527
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP023848.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.6e-11174221455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  PCP023848.1 174 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 221
                  8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MNSVVDKMDP PLINESSFSA ANPASFSLAE IWPFSGEPGG SGGGLGLRMG NLGQSLGGLG  60
DSSVNRDGSL EESTVTEQSG GGGGGGGRKR RDVSSEDESS KQVSTSSGNG LKDSGGKRMK  120
LAGSSNENGS LRAEVEESSA AGDNKPAEES TKPSEPPKQD FIHVRARRGQ ATDSHSLAER  180
ARREKISERM KILQDLVPGC NKVIGKALVL DEIINYIQSL QHQVEFLSMK LEAVNSRMNM  240
NPTIEAFPPK DVSKLHFYNL HKIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62610.12e-68bHLH family protein