PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP023681.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 228aa MW: 26254.6 Da PI: 10.1188 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.7 | 2.3e-31 | 24 | 73 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++g+lyey+ PCP023681.1 24 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYA 73 79***********************************************8 PP | |||||||
2 | K-box | 78.7 | 1.5e-26 | 92 | 184 | 4 | 96 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 ++g s++ea+++ +qqe++kL+++i+++q+++Rh+lGe+L++L++keL++Le +Lek++++iRskK+ l + + l+ k e ++e+++ ++ PCP023681.1 92 TDGGSVSEANTQFYQQEASKLRRQIREIQNSNRHILGESLSTLKVKELKNLEGRLEKGISRIRSKKETELQHHNNFLRAKIAESEREQQQQQT 184 566779**************************************************************************9999999887655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MEFPNQAPES STQKKLGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL 60 IVFSTRGRLY EYANNSVRAT IDRYKKACAD STDGGSVSEA NTQFYQQEAS KLRRQIREIQ 120 NSNRHILGES LSTLKVKELK NLEGRLEKGI SRIRSKKETE LQHHNNFLRA KIAESEREQQ 180 QQQTHMMPGT SYDPSMPSNS YDRNFFPVIL ESNNNHYPRQ GQTALQLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58780.1 | 1e-106 | MIKC_MADS family protein |