PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP023654.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 470aa MW: 53414.4 Da PI: 10.1231

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP023654.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	134.6	6.6e-42	19	145	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.k 96 p GfrF+Pt+eel+++yL+ k+egk+ +++vi+e++i+++ePwdLp + vk++++ewyfFs+ +k++ ++++ratk+g+Wk tg +k+v+++ + PCP023654.1 19 PLGFRFRPTEEELIDFYLQMKLEGKDYLVSDVIREINICSHEPWDLPgfSLVKSDDQEWYFFSTYKKNN--RNQTERATKKGFWKITGAQKPVKTQdN 114 89**********************9999*************6448888999**998865..569****************9966 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyr 127 ++ +g k++L+fy+g+ +++++t+W mhey PCP023654.1 115 RTIIGKKRILTFYRGTVRNSQRTNWGMHEYY 145 6679************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MAANRNRFTR AAAGDLTVPL GFRFRPTEEE LIDFYLQMKL EGKDYLVSDV IREINICSHE 60 PWDLPGFSLV KSDDQEWYFF STYKKNNRNQ TERATKKGFW KITGAQKPVK TQDNRTIIGK 120 KRILTFYRGT VRNSQRTNWG MHEYYIPQPN PNADQEMSLQ MLSEPPVDSS HSRRQEGVML 180 YQAQAASSVN VVPKPQTDHL QVVTDEHSGT HRRQLVNDEH SGTHQRTSRP QRESRHNKAL 240 NVKNASSVDV DAELPQIKCI RLAPDEYYNN ERTRRRTNPT SALEALSKQK ELKQQQSKAK 300 EAAELRAAVD FPPKLTSITK SNKEAEVAQG DNAEKGVKQT QNTTTTCNWK GCSFISWETS 360 PPLTSPPSEY LFNMVLGIIM FCLFAWQGSG RPSEQGRNRG RTGIHCQRQF DRLSPIPEPP 420 IGLKRSGPGC PVTQLTRKKT VRLFIRMMSS GFGVGPTMPS TVERKEVVNG

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MAANRNRFTR AAAGDLTVPL GFRFRPTEEE LIDFYLQMKL EGKDYLVSDV IREINICSHE  60
PWDLPGFSLV KSDDQEWYFF STYKKNNRNQ TERATKKGFW KITGAQKPVK TQDNRTIIGK  120
KRILTFYRGT VRNSQRTNWG MHEYYIPQPN PNADQEMSLQ MLSEPPVDSS HSRRQEGVML  180
YQAQAASSVN VVPKPQTDHL QVVTDEHSGT HRRQLVNDEH SGTHQRTSRP QRESRHNKAL  240
NVKNASSVDV DAELPQIKCI RLAPDEYYNN ERTRRRTNPT SALEALSKQK ELKQQQSKAK  300
EAAELRAAVD FPPKLTSITK SNKEAEVAQG DNAEKGVKQT QNTTTTCNWK GCSFISWETS  360
PPLTSPPSEY LFNMVLGIIM FCLFAWQGSG RPSEQGRNRG RTGIHCQRQF DRLSPIPEPP  420
IGLKRSGPGC PVTQLTRKKT VRLFIRMMSS GFGVGPTMPS TVERKEVVNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	4e-38	NAC family protein