PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP023125.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bZIP

Protein Properties

Length: 425aa MW: 46213 Da PI: 6.4009

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP023125.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.5	3.3e-14	230	285	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++kr rr+ +NRe+ArrsR+RK+a + eLee + +L +N++L k+l k++ + PCP023125.1 230 DVKRVRRMLSNRESARRSRRRKQAHLTELEEQASQLRVKNSSLMKRLTDADKKYNE 285 68*******************************************99988888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MMDKVFSVEE MSDQLWSSSG PPANGGAADG DDLSKLNRSA SEWAFQRFLQ EASPYSPSPS 60 PPTPPPPHHS SSSSSSAHHH DQDDVKEIKM VNSQHPHPNP TQTHCNNNTA AFNLRPPNVA 120 VDSEEYQAFL KTKLDLACAA VALSRVKGSL VNAQEPVASA DSGSHASSTS LLASQAPSKG 180 AGYDLPSSPA TQHRSAIPVR QATSGSSREM TDDEEAEGET AMNENMEPAD VKRVRRMLSN 240 RESARRSRRR KQAHLTELEE QASQLRVKNS SLMKRLTDAD KKYNEAAVDN RVLKADIETL 300 RAKVKMAEET VKRLTGSNPM FHAMLEMSSI GMAPFDGSPS EASTDAAVPV QDDPNQYFFQ 360 PASDNPIPTH DPRVKNDSTD VPSVENVQKN SAATSPADVS ENKMGRTPSL QRVASLEHLQ 420 KRIRG

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MMDKVFSVEE MSDQLWSSSG PPANGGAADG DDLSKLNRSA SEWAFQRFLQ EASPYSPSPS  60
PPTPPPPHHS SSSSSSAHHH DQDDVKEIKM VNSQHPHPNP TQTHCNNNTA AFNLRPPNVA  120
VDSEEYQAFL KTKLDLACAA VALSRVKGSL VNAQEPVASA DSGSHASSTS LLASQAPSKG  180
AGYDLPSSPA TQHRSAIPVR QATSGSSREM TDDEEAEGET AMNENMEPAD VKRVRRMLSN  240
RESARRSRRR KQAHLTELEE QASQLRVKNS SLMKRLTDAD KKYNEAAVDN RVLKADIETL  300
RAKVKMAEET VKRLTGSNPM FHAMLEMSSI GMAPFDGSPS EASTDAAVPV QDDPNQYFFQ  360
PASDNPIPTH DPRVKNDSTD VPSVENVQKN SAATSPADVS ENKMGRTPSL QRVASLEHLQ  420
KRIRG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	252	RRSRRRKQ
2	247	252	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	1e-68	bZIP family protein