PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP023091.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 351aa MW: 39771.2 Da PI: 4.7927 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 180.6 | 4e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lppGfrFhPtdeelv +yL +k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyf+s+rd+ky++g+r+nrat++gyWkatgkd++v s + PCP023091.1 6 LPPGFRFHPTDEELVAYYLDRKINGRTIEL-EIIPEVDLYKCEPWDLPdKsFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRAVSS-Q 101 79****************************.99**************96435566888*************************************9.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 +++vg+kktLv+y+grap+g +t+Wvmheyrl PCP023091.1 102 SRAVGMKKTLVYYRGRAPHGIRTNWVMHEYRL 133 99****************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 351 aa Download sequence |
MAPMSLPPGF RFHPTDEELV AYYLDRKING RTIELEIIPE VDLYKCEPWD LPDKSFLPSK 60 DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRAVSS QSRAVGMKKT LVYYRGRAPH 120 GIRTNWVMHE YRLVDSVCAN ASSSLKDSYA LCRVFKKTIQ MPKNNKEEKP VGINNADKDS 180 IWVSNEQLFG KENSGINEGA SRGIETDQDG NYSNHDYPKF PSDTSSSDLT QGTPTENGIA 240 DDLQAPFASD EANSSADLYS FGVHCSSDLI QETYIPHNTS VLNSYQFPYP PLQLEDFPQI 300 NLAAETKTAK PEIIDEYMLY DKFKGDMNGT FEEIFSLCSS QDNSVAFSMQ D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G54330.1 | 1e-110 | NAC family protein |