PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022886.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CAMTA

Protein Properties

Length: 963aa MW: 107633 Da PI: 5.5615

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022886.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	139.7	9.1e-44	3	85	36	118
CG-1 36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 gsl L++rk++ryfrkDG++w+kk+dgktv+E+hekLKvg+v+vl+cyYah+e++++fqrrcyw+Le++l +iv+vhyl+vk PCP022886.1 3 GGSLYLFDRKVLRYFRKDGHNWRKKRDGKTVKEAHEKLKVGSVDVLHCYYAHGEDDESFQRRCYWMLEQDLMHIVFVHYLQVK 85 69******************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 963 aa Download sequence
MPGGSLYLFD RKVLRYFRKD GHNWRKKRDG KTVKEAHEKL KVGSVDVLHC YYAHGEDDES 60 FQRRCYWMLE QDLMHIVFVH YLQVKGHRAN AGGIRENDEV APDLQRGSPW TSSPSNSNGR 120 APSGYTDYAS PSSTLTSSWE DVDSGDSRQA SSLFHSVFES PKMGNGPLVD NAEIDLSLHS 180 SSKNHDGQSS IHGVYRPEFD KDQCRFTDDS TSVIDSQKTL GAGSWEEILE QCTMGFHDGT 240 SHASMSSTQI SSTGVPLEQQ TSGNNLLKEE FGSSLPLQTN WQFPLGDNSL QLPEWSLDQS 300 MNLQRTPDAN LSNAPGLGSA YLNQRNEQLV QDNLQAQLTN AESQCLIISS PEHDVPKDGN 360 INYAFTLRQQ LLDREEGLKK VDSFSRWVSK ELGEVDDLQM QSSSGISWIT AECGDVVDDS 420 SLSPSISQDQ LFSIVDFSPK WAYTDSEIEV LVFGTFLVSQ KEVTQYSWSC MFGEVEVPAK 480 VLASGVLFCF APPHSAGQVP FYVTCSNRLA CSEVREFDYQ VGSTKGLDMT DISNDTAYEM 540 HLHLRLESLL SLRSVSPSGH LFGGVKENRN IISKIISLKE EEDYLHAAEP TVVNYLLQNE 600 GMEHLIKLMK EKLYTWLLYK AIEDGKGPSV LDAEGQDPGA LTDPSPEVPL GITPADLASV 660 NSHKGISGFL AESSLTTYFK SLKMNDAKED SAAEIPGTKV VKTFSERIAT PVSYGDMPDA 720 LSLKDSLTAV TNATQAADRI QQMLRMQSFE RRRIIEHDID ELGMPDERAI SLITSKSHKV 780 GPVNGFAHTA AVQIQKKFRG WKKRKEFLII RQRIVKIQAH VRGHQVRKQY KAITWSVGIL 840 EKVILRWRRK GTGLRGFRPD AVAKIPSPQP VPSKEDDYDF LKKGRKQTEE RLQKALTRVK 900 SMVQYPEGRA QYRRLLNVVE GFRETKVSGM AVEGSEEKAE GGEDLIDIDK LLDDDTFMSI 960 AFD

Sequence ? help Back to Top

Protein Sequence Length: 963 aa Download sequence

MPGGSLYLFD RKVLRYFRKD GHNWRKKRDG KTVKEAHEKL KVGSVDVLHC YYAHGEDDES  60
FQRRCYWMLE QDLMHIVFVH YLQVKGHRAN AGGIRENDEV APDLQRGSPW TSSPSNSNGR  120
APSGYTDYAS PSSTLTSSWE DVDSGDSRQA SSLFHSVFES PKMGNGPLVD NAEIDLSLHS  180
SSKNHDGQSS IHGVYRPEFD KDQCRFTDDS TSVIDSQKTL GAGSWEEILE QCTMGFHDGT  240
SHASMSSTQI SSTGVPLEQQ TSGNNLLKEE FGSSLPLQTN WQFPLGDNSL QLPEWSLDQS  300
MNLQRTPDAN LSNAPGLGSA YLNQRNEQLV QDNLQAQLTN AESQCLIISS PEHDVPKDGN  360
INYAFTLRQQ LLDREEGLKK VDSFSRWVSK ELGEVDDLQM QSSSGISWIT AECGDVVDDS  420
SLSPSISQDQ LFSIVDFSPK WAYTDSEIEV LVFGTFLVSQ KEVTQYSWSC MFGEVEVPAK  480
VLASGVLFCF APPHSAGQVP FYVTCSNRLA CSEVREFDYQ VGSTKGLDMT DISNDTAYEM  540
HLHLRLESLL SLRSVSPSGH LFGGVKENRN IISKIISLKE EEDYLHAAEP TVVNYLLQNE  600
GMEHLIKLMK EKLYTWLLYK AIEDGKGPSV LDAEGQDPGA LTDPSPEVPL GITPADLASV  660
NSHKGISGFL AESSLTTYFK SLKMNDAKED SAAEIPGTKV VKTFSERIAT PVSYGDMPDA  720
LSLKDSLTAV TNATQAADRI QQMLRMQSFE RRRIIEHDID ELGMPDERAI SLITSKSHKV  780
GPVNGFAHTA AVQIQKKFRG WKKRKEFLII RQRIVKIQAH VRGHQVRKQY KAITWSVGIL  840
EKVILRWRRK GTGLRGFRPD AVAKIPSPQP VPSKEDDYDF LKKGRKQTEE RLQKALTRVK  900
SMVQYPEGRA QYRRLLNVVE GFRETKVSGM AVEGSEEKAE GGEDLIDIDK LLDDDTFMSI  960
AFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein