PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022776.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 363aa MW: 41498.2 Da PI: 5.3943

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022776.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.7	2.5e-35	47	138	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+ ++++sws++g sfvv+d+++f ++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++ik PCP022776.1 47 FLNKTYDMVDDPVSNRVVSWSREGGSFVVWDPHTFVMSLLPRYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFVRGQKHLLKNIK 134 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k PCP022776.1 135 RRKA 138 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MNYLYPVKEE YPGSTSTQSG PDFDPMVMMI PPPQPMEGLN DTGPPPFLNK TYDMVDDPVS 60 NRVVSWSREG GSFVVWDPHT FVMSLLPRYF KHNNFSSFVR QLNTYGFRKV DPDRWEFANE 120 GFVRGQKHLL KNIKRRKAPS QPFPAQQTVG TCVELGQFGL DGEVDRLRRD KQVLMMELVK 180 LRQQQQSTRA YLQAMEQRLQ KTEMKQRQMM AFLARAMQNP AFIQQLVQHK EKRKELDEAM 240 TKKRRRPIDQ GTSGVGGGES SLRGKGINPV KNEPLEFGDC EYEMSELEAL AMEMQGLGKV 300 RKEQGEVVEP LDSGDKELDE GFWEELFSER FKGDLTIPSA EVGEDEDVII LADRLGYVGS 360 SPK

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MNYLYPVKEE YPGSTSTQSG PDFDPMVMMI PPPQPMEGLN DTGPPPFLNK TYDMVDDPVS  60
NRVVSWSREG GSFVVWDPHT FVMSLLPRYF KHNNFSSFVR QLNTYGFRKV DPDRWEFANE  120
GFVRGQKHLL KNIKRRKAPS QPFPAQQTVG TCVELGQFGL DGEVDRLRRD KQVLMMELVK  180
LRQQQQSTRA YLQAMEQRLQ KTEMKQRQMM AFLARAMQNP AFIQQLVQHK EKRKELDEAM  240
TKKRRRPIDQ GTSGVGGGES SLRGKGINPV KNEPLEFGDC EYEMSELEAL AMEMQGLGKV  300
RKEQGEVVEP LDSGDKELDE GFWEELFSER FKGDLTIPSA EVGEDEDVII LADRLGYVGS  360
SPK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	130	136	LKNIKRR
2	232	246	KRKELDEAMTKKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-117	HSF family protein