PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022737.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Trihelix
Protein Properties Length: 335aa    MW: 37808.2 Da    PI: 5.7569
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022737.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix86.92.4e-2740133186
     trihelix   1 rWtkqevlaLiearremeerlrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  rWt+qe+l+Li+++r+ e+r + +         + +p+W++vs++++++g++r+p+qC+++w+nl++++kki+e+e +r++e++s +++ ++l+
  PCP022737.1  40 RWTRQEILVLINGKRYAESRGGGRTprsdfgsgQSEPKWAAVSNYCKKHGVNREPVQCRKRWSNLAGDFKKIREWEAQRKDETESFWVMRNDLR 133
                  8*******************9954334455566**************************************************999*9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MVMALEQQVV LSPVDGDANG ADARHPTSGD DSSKAPRLPR WTRQEILVLI NGKRYAESRG  60
GGRTPRSDFG SGQSEPKWAA VSNYCKKHGV NREPVQCRKR WSNLAGDFKK IREWEAQRKD  120
ETESFWVMRN DLRRERKLPG FFDKEVYDIM EAVPGTPTTL ALPGPNRVES EELKEEGMAE  180
EAENLFDSIQ RPTEDGLFLD DESGRSPEKE VRFKEGPVIS APLPISEKVY KPMPQGHQGQ  240
GAADPKHPAS IPEFGSTSQD RKRKRFATEG EEEASDLQNQ LVDVMERNSK VLADYLHAQN  300
SHSQLDREQR KEHSDNVVAV LNKLADAFMR IAEKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.17e-92Trihelix family protein