PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022622.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 460aa MW: 52649.1 Da PI: 7.1669

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022622.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.8	1.1e-49	28	153	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp++++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + s++ + PCP022622.1 28 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENFRS 124 79*************************.89***********888889***************************************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkktLvfy+g+apkg +t+W+m+eyrl PCP022622.1 125 IGLKKTLVFYSGKAPKGIRTSWIMNEYRL 153 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MSHDDSNKAD HEHEHDEYVD EHEHDMVMPG FRFHPTEEEL VEFYLRRKVE GKRFNVELIT 60 FLDLYRYDPW ELPAMAAIGE KEWFFYVPRD RKYRNGDRPN RVTTSGYWKA TGADRMIRSE 120 NFRSIGLKKT LVFYSGKAPK GIRTSWIMNE YRLPHHETER YQKGEISLCR VYKRAGVEDH 180 PSLPRCLPAS RASTSRSSVL VAQSTIRSDN KKQHTNNINT VDSVIEKLQA FNEGQSQQIH 240 HDHEHQMDQK MNIETEGSSR NSDVTTVLRL SKHKAYPQGH HQHHNIESST AAALGQPGAP 300 THPVDQEEGM AAFSHHSANS KQSAANCSSV ISSTGNSCAA LFTSGSSSVL SSNMNAIDDL 360 HRLLNYQPVN VQQQAASNHH QHQQYVHHHL VQYYDHHHHH PQPSNLFSTN FPSAAAALST 420 IQPQQQQLPS NTLPTAFSDR LWDWNPISEP TRPDYNNLFK

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MSHDDSNKAD HEHEHDEYVD EHEHDMVMPG FRFHPTEEEL VEFYLRRKVE GKRFNVELIT  60
FLDLYRYDPW ELPAMAAIGE KEWFFYVPRD RKYRNGDRPN RVTTSGYWKA TGADRMIRSE  120
NFRSIGLKKT LVFYSGKAPK GIRTSWIMNE YRLPHHETER YQKGEISLCR VYKRAGVEDH  180
PSLPRCLPAS RASTSRSSVL VAQSTIRSDN KKQHTNNINT VDSVIEKLQA FNEGQSQQIH  240
HDHEHQMDQK MNIETEGSSR NSDVTTVLRL SKHKAYPQGH HQHHNIESST AAALGQPGAP  300
THPVDQEEGM AAFSHHSANS KQSAANCSSV ISSTGNSCAA LFTSGSSSVL SSNMNAIDDL  360
HRLLNYQPVN VQQQAASNHH QHQQYVHHHL VQYYDHHHHH PQPSNLFSTN FPSAAAALST  420
IQPQQQQLPS NTLPTAFSDR LWDWNPISEP TRPDYNNLFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-113	NAC family protein