PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP022456.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | AP2 | ||||||||
Protein Properties | Length: 113aa MW: 12973.3 Da PI: 10.4516 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 41.8 | 2.6e-13 | 47 | 103 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa a++ a++k++g PCP022456.1 47 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEEAAAHAYDLAALKYWG 103 57*******************99998898888888********************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence |
MAKLSHQNQK LNANNNTNAT AANTTTVTKV KRTRRSVPRD SPPQRSSIYR GVTRHRWTGR 60 YEAHLWDKNC WNESQNKKGR QGAYDDEEAA AHAYDLAALK YWGQDTILNF PVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.1 | 4e-34 | AP2 family protein |