PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP022003.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 288aa    MW: 31764.8 Da    PI: 10.462
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP022003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.3e-20151201256
          AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                   y+GVr ++ +grW AeIrd       r r++lg+f+taeeAa+a++aa+++l+g+
  PCP022003.1 151 NYRGVRKRP-WGRWSAEIRDrI----GRCRHWLGTFDTAEEAARAYDAAARRLRGA 201
                  59*******.**********32....25**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MNNQTLATVP LYSNPVMFHA QPETFRFLTE TNSLYESYLR KAHFSDSTIS IPTQLKIFNQ  60
PSHTNFSPEV PLVGVNDKGP ESQAETPPVL DGIAAVVGQH VLFGKKNSST SNNGESSLIP  120
DFGYVSDRLG TAETSIKHAD NKKSNVPVQK NYRGVRKRPW GRWSAEIRDR IGRCRHWLGT  180
FDTAEEAARA YDAAARRLRG AKARTNFEIP SVFPLSLHCS PPSSSDAKRA RSAKRPPKGS  240
KSNRKCSVVT SVAHLFSEAP TDLRSSQVKI RNVELDLKIG VGVSFNGN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.17e-25ERF family protein