PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021810.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 369aa    MW: 39288.2 Da    PI: 9.0462
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021810.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.82.7e-3986146262
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                  +e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+
  PCP021810.1  86 PEQALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 146
                  5799******************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
MVFSSIPAYL DPANWQQQPN QHHHLTGSNT NNISNNNIDN NNSHFLPPPP QPPPSNPHGG  60
SGVGGSGSIR PGSMADRARM ANIPLPEQAL KCPRCESTNT KFCYFNNYSL TQPRHFCKTC  120
RRYWTRGGAL RNVPVGGGCR RNKRSKGTSS SASKSPASSS DPPTGSASSS GHANLGLNNN  180
STAGSADNDN MMMSPQIPPL RFMSPFATDM ALNFGMMNNN YGIGDLNGFH QMGSGPGASG  240
GSLFNFQQQT PSFPFMAGLD PTSAGLMFES SGVELTGYNQ VRPRAPSAGM SIPQMASVKT  300
ELESQQQQQQ NQELNLSRQL LGMNNNSGND QFWSNGGRGG GGASTTTAWT DLSGFNSTST  360
TSNNINNPL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1336342GGRGGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.18e-49Dof family protein