PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP021802.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CAMTA

Protein Properties

Length: 639aa MW: 71990.5 Da PI: 6.9209

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP021802.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	135.6	1.7e-42	3	111	3	118
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100 + k+rwl+++ei+aiL n++ ++++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+ ptf rr+ PCP021802.1 3 EAKSRWLRPNEIHAILYNYKYFTIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERVHVYYAHGEDSPTFVRRSL- 99 459*****************************************************************************************875. PP CG-1 101 lLeeelekivlvhylevk 118 e+ivlvhy+e++ PCP021802.1 100 ------EHIVLVHYRETQ 111 ......79*****986 PP

Sequence ? help Back to Top
Protein Sequence Length: 639 aa Download sequence
MEEAKSRWLR PNEIHAILYN YKYFTIHVKP VNLPKSGTIV LFDRKMLRNF RKDGHNWKKK 60 KDGKTVKEAH EHLKVGNEER VHVYYAHGED SPTFVRRSLE HIVLVHYRET QEVQGSPVTP 120 VNSNSSSVSD PSAPWFLSEE LDSGANNAYC AGENELPELG DRFTVNNHEQ RLHDINTLEW 180 EELLVTNDSK EKPDNVSGYD QQNQVVGNGS NSGEASSLSA EISSIGNLTN PTAGSENIQF 240 NLPGSHVETV GGEVKSNAQR RDSIAKEDKT VLDTNGLYSQ DSFGRWINEI MTDSQPSVED 300 PVLDSSLSAA QNSFASPTMD HLQSSVPQQI FNITDISPTE KMVAVLLSAG AKPNLVTDPT 360 KDNPGGSTAA DLAFMKGHDG LAAYLSEKAL VEQFKDMRMA GNASGSIDIR SNYAANSENL 420 SEEELYLKDT LAAYRTAADA AARIQAAFRE NSLKQKTKAI QYSIPEAEAH GIIAALKIQH 480 AFRNYEAKKK IKAAAHIQYR FRTWKMRQEF LSLRRQAIKI QAAFRGFQVR RQYRKVLWSV 540 GVLEKAVLRW RFKRRGLRGL KVAPAEVSAD QNQESDTEED FYRASRKQAE ERIERSVVRV 600 QAMFRSKKAQ QEYSRMKMAH DEATLEFDDF LDPDAIMDN

Sequence ? help Back to Top

Protein Sequence Length: 639 aa Download sequence

MEEAKSRWLR PNEIHAILYN YKYFTIHVKP VNLPKSGTIV LFDRKMLRNF RKDGHNWKKK  60
KDGKTVKEAH EHLKVGNEER VHVYYAHGED SPTFVRRSLE HIVLVHYRET QEVQGSPVTP  120
VNSNSSSVSD PSAPWFLSEE LDSGANNAYC AGENELPELG DRFTVNNHEQ RLHDINTLEW  180
EELLVTNDSK EKPDNVSGYD QQNQVVGNGS NSGEASSLSA EISSIGNLTN PTAGSENIQF  240
NLPGSHVETV GGEVKSNAQR RDSIAKEDKT VLDTNGLYSQ DSFGRWINEI MTDSQPSVED  300
PVLDSSLSAA QNSFASPTMD HLQSSVPQQI FNITDISPTE KMVAVLLSAG AKPNLVTDPT  360
KDNPGGSTAA DLAFMKGHDG LAAYLSEKAL VEQFKDMRMA GNASGSIDIR SNYAANSENL  420
SEEELYLKDT LAAYRTAADA AARIQAAFRE NSLKQKTKAI QYSIPEAEAH GIIAALKIQH  480
AFRNYEAKKK IKAAAHIQYR FRTWKMRQEF LSLRRQAIKI QAAFRGFQVR RQYRKVLWSV  540
GVLEKAVLRW RFKRRGLRGL KVAPAEVSAD QNQESDTEED FYRASRKQAE ERIERSVVRV  600
QAMFRSKKAQ QEYSRMKMAH DEATLEFDDF LDPDAIMDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	1e-103	CAMTA family protein