PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP021509.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 404aa MW: 43690.5 Da PI: 5.6957

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP021509.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.6	1.8e-30	277	327	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k+r+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQ PCP021509.1 277 KARMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVDGLTIYHVKSHLQ 327 68************************************************9 PP
2	Myb_DNA-binding	50.1	6.6e-16	279	327	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWT+e++e +v+av+qlGg t+k + + m g+t +++ks++q PCP021509.1 279 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvDGLTIYHVKSHLQ 327 89****************99***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MEARPAMSIR RSAAKQLTHM GVPSTVSSSL PVLPTSLEET HPKLPDSQQV SIERELMTRP 60 VVHAGHLTSN SGVVGHIFSS SSGFSTDLHY STLSPHEKQP KNSPFISQSS SSAALPLPHS 120 PHSGFLQSTE SCPYPKENSG SWCTDPLPGF LDFPVNNHIE NSQIESSSCS GIMAADEFVK 180 RHDWQEWADQ LITDDDALTS NWNELLVDNV TDLEQKMKYQ APKPSSNFSV QQSQVHQQQP 240 ASSGEIIPAS SGEIIPAPSR EIISVAAPSS ANSATAKARM RWTPELHEAF VEAVNQLGGS 300 ERATPKGVLK LMKVDGLTIY HVKSHLQPSD ATQVCLDKSE PESSKLEQGE TQTDPVKANS 360 TSSGGSQEPE GKKKAPETET VPQNPEPDVV VASSQPPKRA KIKE

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MEARPAMSIR RSAAKQLTHM GVPSTVSSSL PVLPTSLEET HPKLPDSQQV SIERELMTRP  60
VVHAGHLTSN SGVVGHIFSS SSGFSTDLHY STLSPHEKQP KNSPFISQSS SSAALPLPHS  120
PHSGFLQSTE SCPYPKENSG SWCTDPLPGF LDFPVNNHIE NSQIESSSCS GIMAADEFVK  180
RHDWQEWADQ LITDDDALTS NWNELLVDNV TDLEQKMKYQ APKPSSNFSV QQSQVHQQQP  240
ASSGEIIPAS SGEIIPAPSR EIISVAAPSS ANSATAKARM RWTPELHEAF VEAVNQLGGS  300
ERATPKGVLK LMKVDGLTIY HVKSHLQPSD ATQVCLDKSE PESSKLEQGE TQTDPVKANS  360
TSSGGSQEPE GKKKAPETET VPQNPEPDVV VASSQPPKRA KIKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	7e-62	G2-like family protein