PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP021413.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 183aa MW: 21173.3 Da PI: 10.7784 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.9 | 1.3e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kri+n + r+vtfskRrng+lKKA+ELS+LCdaevavi+fs++gk ye++s PCP021413.1 9 KRIDNRTSRHVTFSKRRNGLLKKAFELSILCDAEVAVIVFSHSGKAYEFAS 59 79***********************************************86 PP | |||||||
2 | K-box | 69 | 1.5e-23 | 84 | 171 | 9 | 96 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 ++ ++e++++e + L++ i+nL+ +++l Ge+L++L ++eL+qLe+qL++++++iRsk +++ e+++ l++k kelqeenk+L k PCP021413.1 84 RSAGTMEYWRNETEELRRTIQNLEMRLKNLAGEELSTLGMQELKQLERQLKTGVERIRSKSRQIISENVNLLKRKHKELQEENKRLLK 171 566779******************************************************************************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MGRGKVELKR IDNRTSRHVT FSKRRNGLLK KAFELSILCD AEVAVIVFSH SGKAYEFASH 60 DINRTIAMYR REVGLPESNN STFRSAGTME YWRNETEELR RTIQNLEMRL KNLAGEELST 120 LGMQELKQLE RQLKTGVERI RSKSRQIISE NVNLLKRKHK ELQEENKRLL KRGYVLAATP 180 AAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.1 | 4e-47 | MIKC_MADS family protein |