PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP021272.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 377aa MW: 41746.9 Da PI: 6.317

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP021272.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.6	2.5e-33	194	252	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s++prsYYrCtsagC vkk+ver ++dp++v++tYeg+H+h+ PCP021272.1 194 LDDGYRWRKYGQKAVKNSPYPRSYYRCTSAGCGVKKRVERLSDDPSTVVTTYEGQHTHP 252 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MDGREEKLKT TDRSNSMANS TVFSDEIPTN FPSFSGMFDM PSSCEDQKVS LGGLMDLLGI 60 PDYAPSLFDF TQTTSSLMMM PPHHHQQQSL PSPASTSTVV ALPERESATT TNTTLEILNN 120 STAPTTPNSS SISSSSNEAA ANNNEEQKTK LQEEEANEQD PEKTQKQLKP KKKNQKRQRE 180 PRFAFMTKSE VDNLDDGYRW RKYGQKAVKN SPYPRSYYRC TSAGCGVKKR VERLSDDPST 240 VVTTYEGQHT HPSPITQRGT MGIARLPDQS TGFISAAAAS SNPFGFQQFL PYQHHYQQQQ 300 QQQQQQQQYA YMYQSSPSLN ISSSPYGGGS GGGPFNISSF STGLLQERDN LEGPAFSSSA 360 SNFLRDHGLL QDIVPQI

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MDGREEKLKT TDRSNSMANS TVFSDEIPTN FPSFSGMFDM PSSCEDQKVS LGGLMDLLGI  60
PDYAPSLFDF TQTTSSLMMM PPHHHQQQSL PSPASTSTVV ALPERESATT TNTTLEILNN  120
STAPTTPNSS SISSSSNEAA ANNNEEQKTK LQEEEANEQD PEKTQKQLKP KKKNQKRQRE  180
PRFAFMTKSE VDNLDDGYRW RKYGQKAVKN SPYPRSYYRC TSAGCGVKKR VERLSDDPST  240
VVTTYEGQHT HPSPITQRGT MGIARLPDQS TGFISAAAAS SNPFGFQQFL PYQHHYQQQQ  300
QQQQQQQQYA YMYQSSPSLN ISSSPYGGGS GGGPFNISSF STGLLQERDN LEGPAFSSSA  360
SNFLRDHGLL QDIVPQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	6e-48	WRKY family protein