PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP020983.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 215aa MW: 24746.9 Da PI: 6.5273 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.3 | 1.4e-19 | 60 | 113 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++++t+eq++ Le F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k+ PCP020983.1 60 KRKLTAEQVDLLELNFGNEHKLESEKKDRLASELGLDPRQVAVWFQNRRARWKN 113 5689************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 114.7 | 5.7e-37 | 59 | 150 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkr+l++eqv lLE +F +e+kLe+e+K +la+eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk++ + ++e++rLe+e+++L+++l+e PCP020983.1 59 KKRKLTAEQVDLLELNFGNEHKLESEKKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSTLKKENEITVAEKCRLESEMSKLKDQLSE 150 9****************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MTTNSHQIVE DDHQMLLISH LYSASDVYTQ IVPPQGASKP ARRRRRKSKG GEAGGVGLKK 60 RKLTAEQVDL LELNFGNEHK LESEKKDRLA SELGLDPRQV AVWFQNRRAR WKNKKLEEEY 120 STLKKENEIT VAEKCRLESE MSKLKDQLSE AEKEIQRLSQ RVDHGGSSNS PSSSLSMEAI 180 DPPFLGEFGV EEYDDVFYMP QNNYIHGMEW MNLYM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 42 | 61 | RRRRRKSKGGEAGGVGLKKR |
2 | 42 | 62 | RRRRRKSKGGEAGGVGLKKRK |
3 | 43 | 62 | RRRRRKSKGGEAGGVGLKKR |
4 | 43 | 63 | RRRRRKSKGGEAGGVGLKKRK |
5 | 44 | 49 | RRRKSK |
6 | 44 | 64 | RRRRRKSKGGEAGGVGLKKRK |
7 | 45 | 65 | RRRRRKSKGGEAGGVGLKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 1e-69 | HD-ZIP family protein |