PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP020877.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Protein Properties

Length: 893aa MW: 98664.1 Da PI: 7.4678

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP020877.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.5	4.9e-18	334	433	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d++g++W +++++ +++s++yvl+ G ++ +L +gD+v+F++ + e++lv+ PCP020877.1 334 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDSKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQSMQLLAGDIVTFSRLE-PEGKLVM 429 89************************555566778***********99899999999.*******************766.7777777 PP EEE- CS B3 95 kvfr 98 ++++ PCP020877.1 430 GFRK 433 7776 PP

Sequence ? help Back to Top
Protein Sequence Length: 893 aa Download sequence
MSSSSSASKV CYNSECKEVK SEFPRKGWRL RTGEYCELCD RCYFAYEEGR FCETFHMNAA 60 GWRCCESCGK RVHCGCIVSS HAFTLLDPGG IECMTCARKN YVMTSNPAWP TSMFFHSPLS 120 ERLKDLSTKN WTQLAGSGPV PWRQAPSLFN SSIPSSELHT RVPHEVDGST GINKLNASER 180 IFVSTLEKKK VEEFSERLMK VNLSIGTQQS LENGIGNPGI NHEEKSSSCL NISQQSASLK 240 EEPSTPQFVP YGSPSETNPQ LGFTGTNLRP IAPLAKNYNG NGVESSGDNQ IRNARPRVDA 300 RGRNQLLPRY WPRFTDQELQ HISGDKNSVI TPLFEKMLSA SDAGRIGRLV LPKKCAEAYF 360 PPISQPEGLP LKVQDSKGKE WIFQFRFWPN NNSRMYVLEG VTPCIQSMQL LAGDIVTFSR 420 LEPEGKLVMG FRKASTSLQS DQENEANKTT NGVSAHAEVE LADPSSWSNV DKSGYIAKEA 480 LEDKSLIPKK RKNSNLGSKS KRLRIENEDV IELKVTWEEA QGLLRPPANH VPTVVVIEGF 540 EFEEYEDAPI LGKPTIYATG RAGEKIQWVQ CEDCFKWRKL PINALLPSKW TCSENSWDPE 600 RSLCSAAQEL TTEQLQDLLP RCNTVASKKL KAAKQDPDNI EVLEGLDTLA NLAILGEGES 660 LPSSAQATTK HPRHRPGCSC IVCIQPPSGK GPKHKQTCTC NVCLTVKRRF RTLMMRREKK 720 QSDKEAETTR RKQHKGQLLV VDKPEDDTLS YCNAGSSSPN QKIEILELSD DDLNMTKSST 780 SPFKGQIDLN IQPEREDELS PGSDSGGMMK LLHDATARYL RQQRLSSSGG SEKSSGNGSQ 840 RAASEAGGGE PLSNGVNLES SNVVNLESSN HDSSNDCPAT LSIKPSASMT ATG

Sequence ? help Back to Top

Protein Sequence Length: 893 aa Download sequence

MSSSSSASKV CYNSECKEVK SEFPRKGWRL RTGEYCELCD RCYFAYEEGR FCETFHMNAA  60
GWRCCESCGK RVHCGCIVSS HAFTLLDPGG IECMTCARKN YVMTSNPAWP TSMFFHSPLS  120
ERLKDLSTKN WTQLAGSGPV PWRQAPSLFN SSIPSSELHT RVPHEVDGST GINKLNASER  180
IFVSTLEKKK VEEFSERLMK VNLSIGTQQS LENGIGNPGI NHEEKSSSCL NISQQSASLK  240
EEPSTPQFVP YGSPSETNPQ LGFTGTNLRP IAPLAKNYNG NGVESSGDNQ IRNARPRVDA  300
RGRNQLLPRY WPRFTDQELQ HISGDKNSVI TPLFEKMLSA SDAGRIGRLV LPKKCAEAYF  360
PPISQPEGLP LKVQDSKGKE WIFQFRFWPN NNSRMYVLEG VTPCIQSMQL LAGDIVTFSR  420
LEPEGKLVMG FRKASTSLQS DQENEANKTT NGVSAHAEVE LADPSSWSNV DKSGYIAKEA  480
LEDKSLIPKK RKNSNLGSKS KRLRIENEDV IELKVTWEEA QGLLRPPANH VPTVVVIEGF  540
EFEEYEDAPI LGKPTIYATG RAGEKIQWVQ CEDCFKWRKL PINALLPSKW TCSENSWDPE  600
RSLCSAAQEL TTEQLQDLLP RCNTVASKKL KAAKQDPDNI EVLEGLDTLA NLAILGEGES  660
LPSSAQATTK HPRHRPGCSC IVCIQPPSGK GPKHKQTCTC NVCLTVKRRF RTLMMRREKK  720
QSDKEAETTR RKQHKGQLLV VDKPEDDTLS YCNAGSSSPN QKIEILELSD DDLNMTKSST  780
SPFKGQIDLN IQPEREDELS PGSDSGGMMK LLHDATARYL RQQRLSSSGG SEKSSGNGSQ  840
RAASEAGGGE PLSNGVNLES SNVVNLESSN HDSSNDCPAT LSIKPSASMT ATG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein