PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP020856.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 374aa MW: 41642.6 Da PI: 7.9671

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP020856.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.2	6.4e-53	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfF++rd+ky++g r+nra++sgyWkatg+dk++l++ ++ PCP020856.1 15 LPPGFRFHPTDEELVVHYLKKKAASIPLPV-TIIAEVDLYKFDPWELPSKATFGEQEWYFFTPRDRKYPNGARPNRAATSGYWKATGTDKPILTSiGN 111 79**************************.89***********8888999**********************************99899 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kk Lvfy g+ pkg kt+W+mheyrl PCP020856.1 112 HNVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MESTDSSSGS QHPQLPPGFR FHPTDEELVV HYLKKKAASI PLPVTIIAEV DLYKFDPWEL 60 PSKATFGEQE WYFFTPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSIG NHNVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RLINNTTTAN MSFSTTKPSD AANKKASLRL DDWVLCRVYK 180 KNNAQRPTMS MEGDHFLHKA EDSNSSMEEG MFLHPSILPT QKPPPFPPPL SSKLPTTNYT 240 ALLESDYHES FFEGILSSSD HQQGSHSHHH DHDHDQFGAI STSSSKTSIP LKRQLSSPFW 300 NDVGSIGSAA AATTTSSSKR FQADLNSENN SFVSMLNQMP QGTAPFYPNP ALLGSLGDEV 360 LRPQFQLPSM NWNS

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MESTDSSSGS QHPQLPPGFR FHPTDEELVV HYLKKKAASI PLPVTIIAEV DLYKFDPWEL  60
PSKATFGEQE WYFFTPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSIG NHNVGVKKAL  120
VFYGGKPPKG IKTNWIMHEY RLINNTTTAN MSFSTTKPSD AANKKASLRL DDWVLCRVYK  180
KNNAQRPTMS MEGDHFLHKA EDSNSSMEEG MFLHPSILPT QKPPPFPPPL SSKLPTTNYT  240
ALLESDYHES FFEGILSSSD HQQGSHSHHH DHDHDQFGAI STSSSKTSIP LKRQLSSPFW  300
NDVGSIGSAA AATTTSSSKR FQADLNSENN SFVSMLNQMP QGTAPFYPNP ALLGSLGDEV  360
LRPQFQLPSM NWNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	1e-104	NAC family protein