PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP020785.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | Trihelix | ||||||||
Protein Properties | Length: 232aa MW: 25976 Da PI: 5.1276 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 88.2 | 9.1e-28 | 44 | 137 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li+++r+ e r + ++ + +p+W++vs++++++g++r+p+qC+++w+nl++++kki+e+e +r++e++s +++ ++l+ PCP020785.1 44 RWTRQEILVLINGKRYAEGRGGVRAprsdfgsgQLEPKWAAVSNYCKKHGVNREPVQCRKRWSNLAGDFKKIREWEAQRKDETESYWVMRNDLR 137 8*******************996433455666699******************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MVMASVQQVT LIPVDGESNG VDARNPTSAD TGGDDSSKAP RLPRWTRQEI LVLINGKRYA 60 EGRGGVRAPR SDFGSGQLEP KWAAVSNYCK KHGVNREPVQ CRKRWSNLAG DFKKIREWEA 120 QRKDETESYW VMRNDLRRER KLPGFFDKEV YDIMEAVPGT PVTLALPGPN RVESEEVKEE 180 GTAEEAENLF DSIQRPTEEG LFSDDESGRS PEKEVRFKEG PGISAPLPIS AK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 7e-67 | Trihelix family protein |