PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP020586.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 131aa MW: 15352.8 Da PI: 10.483 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 95.7 | 7.3e-30 | 35 | 107 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +ekewyfFs rd+ky++g+r+nra sgyWkatg dk++ + + g+kk Lvfy g+ap+g+kt+W+mheyrl PCP020586.1 35 GEKEWYFFSLRDRKYPNGSRPNRAGGSGYWKATGVDKPIGH--PKSLGIKKALVFYVGKAPRGKKTNWIMHEYRL 107 579************************************99..6789**************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence |
MSSVDFQLPS RFRFHSTDEE LVKHYLYRKC LALYGEKEWY FFSLRDRKYP NGSRPNRAGG 60 SGYWKATGVD KPIGHPKSLG IKKALVFYVG KAPRGKKTNW IMHEYRLADV DQSPRKKNSL 120 RVYMLLSFLL D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 3e-63 | NAC family protein |