PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020558.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 300aa    MW: 33676.7 Da    PI: 5.7887
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020558.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.3e-162576155
          AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa a++ a+ +++g
  PCP020558.1 25 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 76
                 89****99**********99966...3.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MEGQSREEYI GSLRRKSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK YLYLGTYATQ  60
EEAATAYDMA AIEYRGLNAV TNFDLSRYIK WLKPNGPNNS ENSGQPNPTI EAKLPNVVRN  120
PNDQDSGLSF FHNLAYSPAE TMTTAQPRPT TATSALGLLL QSSKFKEMME MTTATDLSSQ  180
PELSTPQCTF PDDIQTYFDC QESSSYAEGE DVIFSELNSF MPPMFQEFEA CRKLSEVLRK  240
LGVVRWKVLD VGILSIGANF MKFGEESSEN ERFKVFPSFP ATGDSRGKKT EYCVSLDGIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G16060.21e-57ERF family protein