PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP020380.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 617aa MW: 68468.2 Da PI: 7.1136

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP020380.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.8	2.1e-09	411	448	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gL+ +qV++WF N R + PCP020380.1 411 FEHflHPYPTDSDKLMLAKQTGLSRSQVSNWFINARVR 448 554459******************************88 PP
2	BELL	105.1	4.8e-34	281	348	5	72
BELL 5 lqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +kk++L+s+l+eV++rYkqy++q+q+v+ sFe vaglg+a+pY++lA ka++rhF+cLk+ai++q+ PCP020380.1 281 STRKKSRLISMLDEVYRRYKQYCQQMQAVARSFEYVAGLGNAAPYANLAIKAMARHFKCLKNAITDQL 348 578**************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MAEGFEPYHV PQQSRRDKLR VLAGQAHPDC LQPGSPSPPP SHLHHALLPL SYDPTTSFIS 60 SSDLLMCAEP AVKEEGSHHH VINHLMGFAS NSTSSSTFRH NNHHPYMDPQ FPLTLTAVQE 120 INANPFLCPP QNVHPLRDFD HQQPPYDDQV VVFKPEPLSL SLSSSQPTNH THHTQQTQNN 180 TNNNSLQRFS SPGINYDSIN SGVSVASVPF GPFTGYASIL KGSRFLKPAQ QLLEEFCDVS 240 SREIYSAKVL TAEDSSSFLD PPIESFGDDD SLTAGGDGGQ STRKKSRLIS MLDEVYRRYK 300 QYCQQMQAVA RSFEYVAGLG NAAPYANLAI KAMARHFKCL KNAITDQLHS RNRNGSHLGH 360 EKDESPMLHS SRSVYGQKSI HTSDFVDHQP VWRPQRGLPE RAVTVLRAWL FEHFLHPYPT 420 DSDKLMLAKQ TGLSRSQVSN WFINARVRLW KPMVEEIHML ETRQAQKASQ RVDLSSNRSS 480 DDHLPSPNSL GSENPSTSTH RVQDTASKRT RSELHDHITM GATEQSLSYS NFPSHMHVGH 540 VGMNMAGGSS SGVSLTLGLH QNNGIGFSAP FPINAAERFG LGLDGNSENY AMVGFEAQNR 600 HYGRDVMGGQ LLHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MAEGFEPYHV PQQSRRDKLR VLAGQAHPDC LQPGSPSPPP SHLHHALLPL SYDPTTSFIS  60
SSDLLMCAEP AVKEEGSHHH VINHLMGFAS NSTSSSTFRH NNHHPYMDPQ FPLTLTAVQE  120
INANPFLCPP QNVHPLRDFD HQQPPYDDQV VVFKPEPLSL SLSSSQPTNH THHTQQTQNN  180
TNNNSLQRFS SPGINYDSIN SGVSVASVPF GPFTGYASIL KGSRFLKPAQ QLLEEFCDVS  240
SREIYSAKVL TAEDSSSFLD PPIESFGDDD SLTAGGDGGQ STRKKSRLIS MLDEVYRRYK  300
QYCQQMQAVA RSFEYVAGLG NAAPYANLAI KAMARHFKCL KNAITDQLHS RNRNGSHLGH  360
EKDESPMLHS SRSVYGQKSI HTSDFVDHQP VWRPQRGLPE RAVTVLRAWL FEHFLHPYPT  420
DSDKLMLAKQ TGLSRSQVSN WFINARVRLW KPMVEEIHML ETRQAQKASQ RVDLSSNRSS  480
DDHLPSPNSL GSENPSTSTH RVQDTASKRT RSELHDHITM GATEQSLSYS NFPSHMHVGH  540
VGMNMAGGSS SGVSLTLGLH QNNGIGFSAP FPINAAERFG LGLDGNSENY AMVGFEAQNR  600
HYGRDVMGGQ LLHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	9e-98	TALE family protein