PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP020369.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NF-YB | ||||||||
Protein Properties | Length: 166aa MW: 18218.5 Da PI: 9.4575 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 37.7 | 4.8e-12 | 8 | 93 | 5 | 84 |
NF-YB 5 drflPianvsrimkkvlPanak......iskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplk 84 ++lP a v r++k l + k + k+a e fi ++++ a+d c+++kr+ti+gdd+l al ++ f ++++pl+ PCP020369.1 8 AEELPKAIVRRVVKDKLSQCHKgdgdliVHKEAILAFSESSRIFIHYLSATANDICREKKRQTISGDDVLKALEEIEFPEFIKPLE 93 5789**********9998876644445467788888899999******************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MEKVVAEAEE LPKAIVRRVV KDKLSQCHKG DGDLIVHKEA ILAFSESSRI FIHYLSATAN 60 DICREKKRQT ISGDDVLKAL EEIEFPEFIK PLEDLRPKNP GKGAGKNEGK NATKNAGRSG 120 GKKAGKNAGT SKTKEVKKKR KLEESSSRKQ GGKDEDNQDE DGSGDE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 137 | 142 | KKKRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 9e-37 | NF-YB family protein |