PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP020224.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 689aa MW: 75480.5 Da PI: 6.2878

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP020224.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.5	5.5e-09	428	465	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + PCP020224.1 428 FEHflHPYPKDSDKILLARQTGLTRSQVSNWFINARVR 465 664459******************************88 PP
2	BELL	126.8	7.8e-41	290	361	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qelq+k +kLls+l+eVd+rYkqy++q+q+v+ssF+++ag gsakpYt++Al++iSrhFrcL+dai++qi PCP020224.1 290 EKQELQSKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVIAGGGSAKPYTAVALQTISRHFRCLRDAITGQI 361 689********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MSAYYAGSNT QKDATPMLYL REPPLPSSYP EAPLLTGNMM MYMNSGSYSD AVAGSSQQQN 60 NCIEVISSVE GSDSNQQQHN VLSHLGGTRI GEQGFSPWRE GRNEMLVTQP MGSSSGILHG 120 GQNLQGQGLS LSLSTQIPSG MQMPSISYRN PNMGFASFLS PNPSVSSEVD GRNGSFRDEQ 180 PRNVEYLPSG FPGGNPDSSK GDLSPYGMSS IARTIPHNKY LKAAQQLLDE VVNVQKALKQ 240 HDREKNQSTH DHQKSFKEGD DGSKNDLESG VSSNPQESAS NSPCELSHAE KQELQSKLTK 300 LLSMLDEVDR RYKQYYHQMQ IVVSSFDVIA GGGSAKPYTA VALQTISRHF RCLRDAITGQ 360 IQATRKSLGE QGASGSMKGV GISRLRYVDQ HLKQQRALQQ LGMMQQHAWR PQRGLPESSV 420 SILRAWLFEH FLHPYPKDSD KILLARQTGL TRSQVSNWFI NARVRLWKPM VEEMYKEEAG 480 DAEMDSNSSS ENAPQTKEGD NTRTMEDGVQ DMQPSASSTG TERCSTGQFM DSKSNHFHDV 540 EMAGSAGAAS FQNVTRHEAE AEYGLVKLRE GQRPGMDDSG LFSDANVQTD RNNERYMAAA 600 AAYQMPELGR FGSGSGVSLT LGLQHCDGGG SLPISRGTHH GFVAVRGDDL YNPAASSVGS 660 ETADFECLDS GNQQQHRFSS SHLLRDFVV

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MSAYYAGSNT QKDATPMLYL REPPLPSSYP EAPLLTGNMM MYMNSGSYSD AVAGSSQQQN  60
NCIEVISSVE GSDSNQQQHN VLSHLGGTRI GEQGFSPWRE GRNEMLVTQP MGSSSGILHG  120
GQNLQGQGLS LSLSTQIPSG MQMPSISYRN PNMGFASFLS PNPSVSSEVD GRNGSFRDEQ  180
PRNVEYLPSG FPGGNPDSSK GDLSPYGMSS IARTIPHNKY LKAAQQLLDE VVNVQKALKQ  240
HDREKNQSTH DHQKSFKEGD DGSKNDLESG VSSNPQESAS NSPCELSHAE KQELQSKLTK  300
LLSMLDEVDR RYKQYYHQMQ IVVSSFDVIA GGGSAKPYTA VALQTISRHF RCLRDAITGQ  360
IQATRKSLGE QGASGSMKGV GISRLRYVDQ HLKQQRALQQ LGMMQQHAWR PQRGLPESSV  420
SILRAWLFEH FLHPYPKDSD KILLARQTGL TRSQVSNWFI NARVRLWKPM VEEMYKEEAG  480
DAEMDSNSSS ENAPQTKEGD NTRTMEDGVQ DMQPSASSTG TERCSTGQFM DSKSNHFHDV  540
EMAGSAGAAS FQNVTRHEAE AEYGLVKLRE GQRPGMDDSG LFSDANVQTD RNNERYMAAA  600
AAYQMPELGR FGSGSGVSLT LGLQHCDGGG SLPISRGTHH GFVAVRGDDL YNPAASSVGS  660
ETADFECLDS GNQQQHRFSS SHLLRDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-132	TALE family protein