PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019943.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

GATA

Protein Properties

Length: 328aa MW: 35549.2 Da PI: 7.024

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019943.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	53.1	4.2e-17	222	256	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +C + kTp+WR gp g+ktLCnaCG++y++ +l PCP019943.1 222 CLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRL 256 99*****************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MELPEFHLGG YFNGGATKLS PEKKPAGGDF TVDDLLDFSN EDPFVTTADG GGGFFDPAAD 60 SSAVTAVDSC NSSVSGGEPQ FSGNRSFGDS QISGALCVPY DDLAELEWLS NFVEDSFSAD 120 KDLQSLQFLS VSNTTKPQTP ETCSSSETPQ NAPLFPSETP LPGKARSKRS RAAPGDWSTR 180 LLHLITPNND TKPPKTTLHK KRDGAIGGGN SHSGSDSSGR KCLHCAAEKT PQWRTGPMGP 240 KTLCNACGVR YKSGRLVPEY RPAASPTFVS ARHSNSHRKV LELRRQKEVQ RSHHHQFLSQ 300 SSIFGVSNGG HDEYLIHHHN VNDFRQMM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32890.1	1e-70	GATA family protein