PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019788.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 286aa    MW: 30967.9 Da    PI: 8.6489
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019788.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.13.8e-382988261
       zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                 +++  +cprC+s+ntkfCyynnyslsqPryfCkaCrryWt+GG+lrnvPvGgg+rk k+ 
  PCP019788.1 29 NQQPHRCPRCHSMNTKFCYYNNYSLSQPRYFCKACRRYWTQGGTLRNVPVGGGCRKGKRD 88
                 578899**************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MQQQQQEGGE QNEQQNQDQR LKAAADQENQ QPHRCPRCHS MNTKFCYYNN YSLSQPRYFC  60
KACRRYWTQG GTLRNVPVGG GCRKGKRDKA GSSSVCASRT VQPQQPQPPQ REQDMLNTLG  120
IGGGSVGMST ENPSGGLAIH HQYYPGASHG YLSSLAGLQS LNQSQPFNVG GGHDPSSSMS  180
LLQGFNLSAP LVVAQPQQRQ QFYQMGGGRS NNLVDQAAPY PSENDQWAPQ SFVNRPSLNA  240
SSSAAAASDS ALWAMGNNPI TTTTTSSTSP NPNQLPDLPG SYRSPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.14e-32Dof family protein