PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019776.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ERF

Protein Properties

Length: 892aa MW: 98545.6 Da PI: 9.4981

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019776.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.8	6.6e-19	14	63	2	55
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrd ++ ++r++lg+f+t+eeAa a++ a++ l+g PCP019776.1 14 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEEAALAYDGAARTLRG 63 69*****.******883....5***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 892 aa Download sequence
MATAAAPSSS REGHYRGVRK RPWGRYAAEI RDPWKKTRVW LGTFDTPEEA ALAYDGAART 60 LRGAKAKTNF PAPIPSGISL DLNAPSATHW ASHSGRLVDF LHTGVLNDMG SDGASTDTPP 120 LMARREPQQT PVGVAGNAPA GGSNDTVPEG SGFGSTALFL GLGWYLRRLT WFNSTLSEEV 180 IPFTVGVFSA HDLWLKLEQQ FGGVSDAHIH QLRSRLQNIQ KGSQSMFDYF QQIKENSYSL 240 TATRASITNH DLIAATLASL LDDFESFTDS ILLRLSSTSL DELHGLLLTT ELSMARRKKT 300 SFSEPFQAFS YNSNRGRHNC NPNRGFRGSN RGNHNSGYNH GTYNSGFNCN ASSSGYKFLC 360 QICGSHNHEA IDCFDRMNSE ISSKVPPAKL ATMCAHYTAK PTHSWLINSG VTSHITNDIS 420 NIQSPTSYNG EDKVYIGDGK GLSINHVGTS ILHTPAHSFK LQNVLHVPQM QRSLLYAYQF 480 IKDNDCSLTL DIHGSSVKDH FTRRTLLQGQ VKDGFFPLQS SSSPYKATHS THAALVSTSA 540 NVKIWHSQLG HPSSIIFRKV LLTNKVAIQG KSSLDFFCND CALAKNHKLP FGAPRSVFTR 600 SLELLHCDVW GPSYIVSVSG YRYYFLMVDD YSKYSRYFPL KFKSSIFSTF VVYKSYVENT 660 LGNKIKAIRS DSGVNPNVTL QFTIPIASYA PVAQPTTCNV PAAHHISPTS SAPNIHPMIT 720 RSKAGISKPK AYSTTKHLLP EYVDFIPTTH PQEFDASLFV LKAPVLVIVL VYVDDILITG 780 PNPTACQQFI QKLGTSFPVK ELGLLHYFLG LEVQRSSACI FLHQSSQKNS PVSQRHNESR 840 FVVQESAKKQ RMIARSSTKA EYISLAHTTA EITWICKVVK DIGLHLPQVP HL

Sequence ? help Back to Top

Protein Sequence Length: 892 aa Download sequence

MATAAAPSSS REGHYRGVRK RPWGRYAAEI RDPWKKTRVW LGTFDTPEEA ALAYDGAART  60
LRGAKAKTNF PAPIPSGISL DLNAPSATHW ASHSGRLVDF LHTGVLNDMG SDGASTDTPP  120
LMARREPQQT PVGVAGNAPA GGSNDTVPEG SGFGSTALFL GLGWYLRRLT WFNSTLSEEV  180
IPFTVGVFSA HDLWLKLEQQ FGGVSDAHIH QLRSRLQNIQ KGSQSMFDYF QQIKENSYSL  240
TATRASITNH DLIAATLASL LDDFESFTDS ILLRLSSTSL DELHGLLLTT ELSMARRKKT  300
SFSEPFQAFS YNSNRGRHNC NPNRGFRGSN RGNHNSGYNH GTYNSGFNCN ASSSGYKFLC  360
QICGSHNHEA IDCFDRMNSE ISSKVPPAKL ATMCAHYTAK PTHSWLINSG VTSHITNDIS  420
NIQSPTSYNG EDKVYIGDGK GLSINHVGTS ILHTPAHSFK LQNVLHVPQM QRSLLYAYQF  480
IKDNDCSLTL DIHGSSVKDH FTRRTLLQGQ VKDGFFPLQS SSSPYKATHS THAALVSTSA  540
NVKIWHSQLG HPSSIIFRKV LLTNKVAIQG KSSLDFFCND CALAKNHKLP FGAPRSVFTR  600
SLELLHCDVW GPSYIVSVSG YRYYFLMVDD YSKYSRYFPL KFKSSIFSTF VVYKSYVENT  660
LGNKIKAIRS DSGVNPNVTL QFTIPIASYA PVAQPTTCNV PAAHHISPTS SAPNIHPMIT  720
RSKAGISKPK AYSTTKHLLP EYVDFIPTTH PQEFDASLFV LKAPVLVIVL VYVDDILITG  780
PNPTACQQFI QKLGTSFPVK ELGLLHYFLG LEVQRSSACI FLHQSSQKNS PVSQRHNESR  840
FVVQESAKKQ RMIARSSTKA EYISLAHTTA EITWICKVVK DIGLHLPQVP HL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28360.1	2e-39	ERF family protein