PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019731.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 367aa MW: 38086.5 Da PI: 6.7995

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019731.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.9	1.8e-34	77	147	3	73
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 +++++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++ti WLl+ a+pai+++tg+++ +a + PCP019731.1 77 PARRSSKDRHTKVEGRGRRIRMPAVCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIQATGSGTVPAIAI 147 57899**********************************************************66666322 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MKSNQRQSLE ESNELEHGGD SNNTTTTTSV SGPFVAEPPA TALTMKEELT DPVQHLDPQG 60 SLSMGIVPVP VSTALKPARR SSKDRHTKVE GRGRRIRMPA VCAARIFQLT RELGHKSDGE 120 TIRWLLEHAE PAIIQATGSG TVPAIAISVG GTLKIPTTSP ARPNGEITEI PNKRKKMRGS 180 TDEFIDAHDQ NSLPSGLAPI APMTYGGGRG GGGFVPMWQV GATGAAGPFF MFPNSGAIQN 240 QPQLWAIPTA DSTTPIFNFQ SRPMSNFVSA FQPGVQVGGI SGGDGQLQAS SGSISSGTAA 300 GGGGSCSSSL GQSLDSASGT SAAAAAAAAP PSSATQMLRD FSLEIYDKKE LQFMGQAANA 360 QTTYSES

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MKSNQRQSLE ESNELEHGGD SNNTTTTTSV SGPFVAEPPA TALTMKEELT DPVQHLDPQG  60
SLSMGIVPVP VSTALKPARR SSKDRHTKVE GRGRRIRMPA VCAARIFQLT RELGHKSDGE  120
TIRWLLEHAE PAIIQATGSG TVPAIAISVG GTLKIPTTSP ARPNGEITEI PNKRKKMRGS  180
TDEFIDAHDQ NSLPSGLAPI APMTYGGGRG GGGFVPMWQV GATGAAGPFF MFPNSGAIQN  240
QPQLWAIPTA DSTTPIFNFQ SRPMSNFVSA FQPGVQVGGI SGGDGQLQAS SGSISSGTAA  300
GGGGSCSSSL GQSLDSASGT SAAAAAAAAP PSSATQMLRD FSLEIYDKKE LQFMGQAANA  360
QTTYSES

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	213	GGGRGGGG
2	207	214	GGGRGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	2e-63	TCP family protein