PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019501.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family GRAS
Protein Properties Length: 692aa    MW: 78198.8 Da    PI: 6.5128
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019501.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS381.69.5e-1173206891373
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l+ lL++cA+av++ d++ a++lL+++++++sp gd++qRla+yf+ +L+arla+ ++ +y+ l  ++ts   +++ l+a+++f   sP+  +s+++a
  PCP019501.1 320 LRALLTQCAQAVANYDQRTASELLQKIRHHSSPCGDANQRLAHYFADGLEARLAGATTPTYSFLVGTQTS---TADILKAYQVFISSSPFKLMSNFMA 414
                  5789************************************************************999999...8************************ PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  N++I++  e+++r+H+iDf+is+G+QWp+++q L++R++gpp+lRiT+++ p++g   +e++eet++rL+k+Ae+++vpfe nv +a+++e++++e+L
  PCP019501.1 415 NRTIMKLSENATRLHVIDFGISYGFQWPCFIQHLSERTGGPPNLRITAIELPQPGfrPTERVEETARRLKKYAERFNVPFECNV-IAQKWETIKFEDL 511
                  ******************************************************9****************************9.7************ PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  r+++ E ++Vn++ +l++++de+v  +s+rd vLkl+k+++P+v+++   +  +n++ F++rf eal++ysa+fd +ea++pre+e r+  E+++ gr
  PCP019501.1 512 RIDRSELTVVNCMCRLKHIPDETVMASSPRDIVLKLIKKINPDVFIHGVVNGTYNAPFFATRFREALYHYSAFFDIFEATVPREDEMRRLFEKAIYGR 609
                  ************************************************************************************************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                  +ivnvvaceg er+er et+++W+ r  +aGFk++pl++   k +k++l+ +++d +r++e+ +++++ W++r+++++S W
  PCP019501.1 610 DIVNVVACEGLERVERPETYKQWQVRNVRAGFKQLPLDQALLKRVKRMLKSYHDD-FRIDEDGNWMLQSWRGRTILALSIW 689
                  *****************************************************66.************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 692 aa     Download sequence    
MDTLLERYDV SMERFNFGSV YPDQSLVNGF KVNHESTNSI FPPTNLDHNS SDSSPYSSTG  60
SDGDSIDPND FNHPMLKYIS DILLEEDLEG KPCMMQGCLA LQAAEKSFFD VLNPKGPPSP  120
NQPPLSHSLE NSDDDSTPSF HSGNGSSIAA KTDWGFDSSE TSHFQSSLVE SQSDNLLVSD  180
LLSELQSSGH FGGVGEASKF LPNGSFGTFD QERNHLTHPG PDLRPPGSRT LVRRPENYGY  240
NSTNILKGKK NHQREDVDYP AEGRSSKLPV AFADDSEPPQ EMFDEVLLCH GHHRLGNKQS  300
KGAKTTRSKK QNNNTEMVDL RALLTQCAQA VANYDQRTAS ELLQKIRHHS SPCGDANQRL  360
AHYFADGLEA RLAGATTPTY SFLVGTQTST ADILKAYQVF ISSSPFKLMS NFMANRTIMK  420
LSENATRLHV IDFGISYGFQ WPCFIQHLSE RTGGPPNLRI TAIELPQPGF RPTERVEETA  480
RRLKKYAERF NVPFECNVIA QKWETIKFED LRIDRSELTV VNCMCRLKHI PDETVMASSP  540
RDIVLKLIKK INPDVFIHGV VNGTYNAPFF ATRFREALYH YSAFFDIFEA TVPREDEMRR  600
LFEKAIYGRD IVNVVACEGL ERVERPETYK QWQVRNVRAG FKQLPLDQAL LKRVKRMLKS  660
YHDDFRIDED GNWMLQSWRG RTILALSIWV PA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein