PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019458.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 470aa    MW: 53277.4 Da    PI: 4.9785
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019458.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.00054160176117
                  EEETTTTEEESSHHHHH CS
      zf-C2H2   1 ykCpdCgksFsrksnLk 17 
                  y+Cp+Cgk+++  + L+
  PCP019458.1 160 YVCPNCGKRYNALDALQ 176
                  9**********999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MSIEPFNKLV KLTARAFYDD IPAKGENQPK TGRSDNRGIA VVVLDALSRR QWVREEDLAK  60
DLKLHSKQLR RTLRFFEEEK LVTRDHRRET AKGAKMHNAA VAATGDGPPV KEGEEKVKMH  120
THSYCCLDYA QIYDVVRYRL HRLRKKLKDE LEDKNTVQEY VCPNCGKRYN ALDALQLVSM  180
EDEYFHCENC NGELVAESDK LASQEVVGDG DDNARRRRRE KLKDLLQKME VQLKPLMEQI  240
NRVKDLSPPE FGSLQAWEAR ASAARRAENG ESSAMDPSKY SHGMGYGGTP MPFLGDTKVE  300
VDFSGVEGKG KDIKSEADGT SLKVLPPWMI KQGMNLTKEQ RGEVKQEQKM DGSGSVAAPE  360
FSEDKKFSTE NNEKNIQDEY LKAYYAALIK RQQEEEAKKE QETRISDGPS AVSPNRQVGM  420
KSKREDEGED NVDWEEAPVT GNAENYKVND LNVEADATAD DEDDIDWEEG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1215221RRRRREK
2216222RRRRREK