PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019404.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 270aa    MW: 29776.7 Da    PI: 8.2979
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019404.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.91.2e-392282262
       zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                 ++++l+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkks+
  PCP019404.1 22 PQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKKST 82
                 6899******************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MEDHDMGSNG CTRSVLEKRA RPQEQLNCPR CNSTNTKFCY YNNYSLTQPR YFCKTCRRYW  60
TEGGTLRNVP VGGGSRKNKK STSSSVSSKI TIPDLNPPTT LSHFSSSHQN PRVTHEGQDL  120
NLGFNAIDAH YHGTTMENNN STNSSSAPNL SAMELLRTGI ASRGVNSYMP TQNMPDHHSN  180
TLYPPSSAGF SLQEYKPTNL GFCVEGLGNR YGGDDHENVN GGRILFPFGD HHLKQISSTA  240
GHHEVLDHHQ NKGQGNPTGY WNGLLGGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.27e-57Dof family protein