PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP019070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NF-YC | ||||||||
Protein Properties | Length: 121aa MW: 13269.4 Da PI: 7.2943 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 111.4 | 5.1e-35 | 23 | 101 | 19 | 96 |
NF-YC 19 helPlarikkilka.dedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 h+lPlarikki+k edvkmis eaP+++skace+fi elt rsw+ + e krrt++k d+a+av tdifdflv v PCP019070.1 23 HSLPLARIKKIMKNsGEDVKMISGEAPIVFSKACEMFIEELTRRSWMTTLEGKRRTVHKDDVASAVVATDIFDFLVSLV 101 99***********6269**********************************************************9877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence |
MRQPGRYSGL TMCGGISGRT GPHSLPLARI KKIMKNSGED VKMISGEAPI VFSKACEMFI 60 EELTRRSWMT TLEGKRRTVH KDDVASAVVA TDIFDFLVSL VSGSCCSEDI TPVEIETLEK 120 S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 2e-35 | NF-YC family protein |