PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019003.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family SBP
Protein Properties Length: 262aa    MW: 29131.9 Da    PI: 8.2196
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP127.45.5e-40161237177
                  --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
          SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                  +Cqv+gC++dl+  k+yh+rh+vC+ hsk++ v+v+g+eqrfCqqCsrfh l efD  krsCrrrLa+hn rrrk+q
  PCP019003.1 161 TCQVHGCNMDLTFSKDYHKRHRVCDPHSKTAIVIVNGIEQRFCQQCSRFHLLAEFDAVKRSCRRRLAGHNLRRRKPQ 237
                  6**************************************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MESWSFGSEG KGFLFPEEMD MPTDAFSRST RKALLELDNK TCFNFGKESV DSMGFMDLGF  60
PDINQGVEIL NGVIGNDSSY NSVASPCCLI SSSSSFGDGE SGSKFSSPVT ESNSMDSSMI  120
ALKLGGFADS RGGQNSQHSI SRERSKRAGN GMRSSYYHAP TCQVHGCNMD LTFSKDYHKR  180
HRVCDPHSKT AIVIVNGIEQ RFCQQCSRFH LLAEFDAVKR SCRRRLAGHN LRRRKPQLDT  240
LDCKPHKLIR SCEATMLPKL EL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69170.18e-34SBP family protein