PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018956.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 355aa MW: 41485.9 Da PI: 6.7949

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018956.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.7	2.7e-54	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPtdeelv++yL+kk+++k++++ +v+++vd+yk+ePwdL+ k+ + +++ewyfF ++dkky+tg+r+nratk+g+Wkatg+dk++++ PCP018956.1 7 VPPGFRFHPTDEELVDYYLRKKTASKPIDF-DVVRDVDLYKIEPWDLEDlcKIGSgDQNEWYFFNHKDKKYPTGHRSNRATKAGFWKATGRDKAIYR- 102 69**************************.99**********943466553556**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ lvg++ktLvfykgrap+g+k+dW+mheyrle PCP018956.1 103 GKFLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MDTLSHVPPG FRFHPTDEEL VDYYLRKKTA SKPIDFDVVR DVDLYKIEPW DLEDLCKIGS 60 GDQNEWYFFN HKDKKYPTGH RSNRATKAGF WKATGRDKAI YRGKFLVGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETSEN GTPQAMRRMG DYESPNCYDQ VPFMQQLDNS PRTSISHTYV 180 SSQYQQQLHY SQCKPELDLQ YNMPHHHHDS FLQLPQLESP KVRHQPATPY GNYVMQSSTL 240 TQEEQLHYFC PQNPFNSSAS SSGHMHYNNT DYLQVVDQVK DWRALDKYVA SQLSHDQQDA 300 SKEVTNYSNA QETFHVAEHI NMLANEASRR PDYNNNGQEY YASTSTSSCQ IDLWK

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MDTLSHVPPG FRFHPTDEEL VDYYLRKKTA SKPIDFDVVR DVDLYKIEPW DLEDLCKIGS  60
GDQNEWYFFN HKDKKYPTGH RSNRATKAGF WKATGRDKAI YRGKFLVGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETSEN GTPQAMRRMG DYESPNCYDQ VPFMQQLDNS PRTSISHTYV  180
SSQYQQQLHY SQCKPELDLQ YNMPHHHHDS FLQLPQLESP KVRHQPATPY GNYVMQSSTL  240
TQEEQLHYFC PQNPFNSSAS SSGHMHYNNT DYLQVVDQVK DWRALDKYVA SQLSHDQQDA  300
SKEVTNYSNA QETFHVAEHI NMLANEASRR PDYNNNGQEY YASTSTSSCQ IDLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-120	NAC family protein