PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP018872.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 356aa    MW: 38699.3 Da    PI: 9.9654
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP018872.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.91.6e-31284341359
                  -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D y+WrKYGqK++kgs++pr+YY+C+s+ gC ++k+ver+ +dp+++++tYeg+Hnh+
  PCP018872.1 284 DDYSWRKYGQKPIKGSPHPRGYYKCSSQrGCLARKHVERAVDDPTMLIVTYEGDHNHS 341
                  99************************999****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MGVELMMGLV DSFAARMEEN AVKEAASAGI QSVEKFISLI SEHHQSTSSN SEAGTEYKAV  60
ADMAVTKFRK VISLLDKGCT GHARFRKAPV PLSPPPLQLV PPKTITQILR PSISESHDQT  120
TEQPSVFRTE QSSAFKVYCP KPVVRLPPLP QNPHLKTSPV VLTKDIGCSE RKMDSAAATT  180
INFSPLAPIS AANSFISSLT TGDPAEQSIS SGFQFTNMSQ SSSGRPPLSS SSLKRKCSSV  240
DNVSRLRCGS TTGRCHCSKK RKSKVKRVIR VPAISMKLAD IPPDDYSWRK YGQKPIKGSP  300
HPRGYYKCSS QRGCLARKHV ERAVDDPTML IVTYEGDHNH SLGVTDPTAT LVLESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.15e-86WRKY family protein