PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018858.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 369aa MW: 42023 Da PI: 4.8353

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018858.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.4	5.5e-53	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lppGfrFhPtdeelv +yL++k+eg ++el evi+ +d+yk++Pw+Lp k + ++ ew+fF++rd+ky++g+r+nratk+gyWkatgkd++v++ + PCP018858.1 6 LPPGFRFHPTDEELVGYYLHRKMEGLEFEL-EVIPVIDLYKFDPWELPeKsFLPRRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVC-Q 101 79**************************.99**********95334455788**********************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + ++g +ktLvfy+grap g +tdW+mheyrl PCP018858.1 102 SDVTGYRKTLVFYRGRAPLGDRTDWIMHEYRL 133 999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MGGASLPPGF RFHPTDEELV GYYLHRKMEG LEFELEVIPV IDLYKFDPWE LPEKSFLPRR 60 DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKVVC QSDVTGYRKT LVFYRGRAPL 120 GDRTDWIMHE YRLTDDLAPG LSGHQGVFAL CRVVKKNEHA QKTHDSHEGP KAKGFGSVLS 180 NKEDMTSIRI STDPLSISAD ILHSNCLNNE SHYSSRATSP YEINPMAEFE PALGETNSAD 240 FWVSPDLILD SSKDYPQLQE AMPDYFQQYE FPSTMMLLQS YEPRESPSSS YSNFTGDLKM 300 ADDVHQIGGM SPFSGYTDYV GYYGNEEMQF EGSETRDRQA LICRQVSADG SLGELGGLWL 360 QEDNMVIVM

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MGGASLPPGF RFHPTDEELV GYYLHRKMEG LEFELEVIPV IDLYKFDPWE LPEKSFLPRR  60
DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKVVC QSDVTGYRKT LVFYRGRAPL  120
GDRTDWIMHE YRLTDDLAPG LSGHQGVFAL CRVVKKNEHA QKTHDSHEGP KAKGFGSVLS  180
NKEDMTSIRI STDPLSISAD ILHSNCLNNE SHYSSRATSP YEINPMAEFE PALGETNSAD  240
FWVSPDLILD SSKDYPQLQE AMPDYFQQYE FPSTMMLLQS YEPRESPSSS YSNFTGDLKM  300
ADDVHQIGGM SPFSGYTDYV GYYGNEEMQF EGSETRDRQA LICRQVSADG SLGELGGLWL  360
QEDNMVIVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	1e-106	NAC family protein