PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018706.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Nin-like

Protein Properties

Length: 823aa MW: 92370 Da PI: 7.3703

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018706.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.2	7.6e-29	523	574	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+l++l+kyFs+++kdAAk++gvc T+LKriCRq+GIkRWP+Rkik++ PCP018706.1 523 AEKDINLQVLRKYFSGSLKDAAKSIGVCSTTLKRICRQHGIKRWPSRKIKKV 574 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 823 aa Download sequence
MAMNTSHNSN QEETQRPFLK QLVEGPVNPQ SPRENMIKDA VAYSGQPVDP TIEGREFSRR 60 WWIGPTGNEG FASSVTERLM RALVNIGEVM RNEDVLVQVW VPVNRGGRHV LTMNELFYLD 120 SSCSRLAKYR DISAKYQFAT GEDSTEMVMG LPGRVFSGKI PEWTPDVRYF RHDEYPRVSH 180 AQQYNVSGTL ALPIFEQGSR TCLGVIEVVT TDQKIKYQPD IDSVCKALEA VDLRSSRNLS 240 TQNVKGCDNP FHAALPEIRE VLRSACETHK LPLAQTWMSC VQQGKDGCRH SDDNYVHCVS 300 TVEHACHVAD PSIQSFHEAC SEHHLLRGQG IVGRAFMTNQ PCFSDDITSF VKTEYPLSHH 360 ARMFDLHAAV AIRLRSIDTG STDFVLEFFL PVECRDPEEQ EKMLTSLSLV MQQTCRSLRV 420 VTDKEVEEET NFHVSEVIAR SDPGPSNIAC FTEVQQNRKD VSMFPNQKPR KVLSVKLSKL 480 RQHQEDSNLK GGVKCGQEFS ALGEGSFSSV TVSKTREKRR TKAEKDINLQ VLRKYFSGSL 540 KDAAKSIGVC STTLKRICRQ HGIKRWPSRK IKKVGHSLQK LQLVIDSVEG ASGAFQINSF 600 YTNFPELTSP NLSGTSPFSS SKLSDQPNQT NLSPKGGVLS PQATASKSPP SSCCQSSSSS 660 QCCSSRTQQL PFSCNIAGND DPVVGDNSRD DVPKRVRSEA VLHAFGQDRA ELLPRSQSQK 720 LLCEQQNLQS IPHSLKNNGR VAQEGKVQRV KVAYGDEKTR FRMQSNWRHE DLVQEIAKRF 780 SIQDMSTYDI KYLDDDSEWV LLTCDDDLEE CVDVCRSSRE PHN

Sequence ? help Back to Top

Protein Sequence Length: 823 aa Download sequence

MAMNTSHNSN QEETQRPFLK QLVEGPVNPQ SPRENMIKDA VAYSGQPVDP TIEGREFSRR  60
WWIGPTGNEG FASSVTERLM RALVNIGEVM RNEDVLVQVW VPVNRGGRHV LTMNELFYLD  120
SSCSRLAKYR DISAKYQFAT GEDSTEMVMG LPGRVFSGKI PEWTPDVRYF RHDEYPRVSH  180
AQQYNVSGTL ALPIFEQGSR TCLGVIEVVT TDQKIKYQPD IDSVCKALEA VDLRSSRNLS  240
TQNVKGCDNP FHAALPEIRE VLRSACETHK LPLAQTWMSC VQQGKDGCRH SDDNYVHCVS  300
TVEHACHVAD PSIQSFHEAC SEHHLLRGQG IVGRAFMTNQ PCFSDDITSF VKTEYPLSHH  360
ARMFDLHAAV AIRLRSIDTG STDFVLEFFL PVECRDPEEQ EKMLTSLSLV MQQTCRSLRV  420
VTDKEVEEET NFHVSEVIAR SDPGPSNIAC FTEVQQNRKD VSMFPNQKPR KVLSVKLSKL  480
RQHQEDSNLK GGVKCGQEFS ALGEGSFSSV TVSKTREKRR TKAEKDINLQ VLRKYFSGSL  540
KDAAKSIGVC STTLKRICRQ HGIKRWPSRK IKKVGHSLQK LQLVIDSVEG ASGAFQINSF  600
YTNFPELTSP NLSGTSPFSS SKLSDQPNQT NLSPKGGVLS PQATASKSPP SSCCQSSSSS  660
QCCSSRTQQL PFSCNIAGND DPVVGDNSRD DVPKRVRSEA VLHAFGQDRA ELLPRSQSQK  720
LLCEQQNLQS IPHSLKNNGR VAQEGKVQRV KVAYGDEKTR FRMQSNWRHE DLVQEIAKRF  780
SIQDMSTYDI KYLDDDSEWV LLTCDDDLEE CVDVCRSSRE PHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein